Gene Plav_0789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0789 
Symbol 
ID5455320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp854694 
End bp855182 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content65% 
IMG OID640876358 
Product17 kDa surface antigen 
Protein accessionYP_001412069 
Protein GI154251245 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4520] Surface antigen 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value0.189654 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTCG TTAAAGGAAT AGCCATCGGT GCGGTTGCGC TGTCGCTCGC AGCTTGCGAC 
CAGAGCATGT ATGGCGGCGG CGGCGGCATC AGCAAACAAA ATGTCGGCAC CGTCGGCGGC
GCGGTCGCGG GCGGTCTGGC GGGTTCGCAG ATCGGCGGCG GCTCGGGCCG TCTCTGGGCC
ACGGGTGCCG GCGTCCTTCT TGGTGCCCTG CTCGGCAGCG AAATCGGCAA ATCCCTTGAT
CGCGCGGACC ATGCCTATAT GGGCCAGACG ACCTATAATG CGCTGGAAAC GGGCCGTTCC
GGCCAGCCGG TGCAGTGGCG CAATCCGGAT TCGGGCCACT ACGGCACGGT GACGCCGCAG
ACCGCCTATC AGCAGGGAAA TCTGCAGTGC CGCGAATATT CGCAGACCGT TTATATCGAC
GGGCGCAGCC AGCAGGCCTA CGGTACGGCG TGCCGCCAGC CGGACGGCTC GTGGCAGATT
CAGAACTGA
 
Protein sequence
MKLVKGIAIG AVALSLAACD QSMYGGGGGI SKQNVGTVGG AVAGGLAGSQ IGGGSGRLWA 
TGAGVLLGAL LGSEIGKSLD RADHAYMGQT TYNALETGRS GQPVQWRNPD SGHYGTVTPQ
TAYQQGNLQC REYSQTVYID GRSQQAYGTA CRQPDGSWQI QN