| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0788 |
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| Symbol | |
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| ID | 5453758 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 853960 |
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| End bp | 854664 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640876357 |
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| Product | Sel1 domain-containing protein |
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| Protein accession | YP_001412068 |
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| Protein GI | 154251244 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 0.191842 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATGTTT GTCGGGCCGC CCCCTTGCCC GCCGCGCTTT TTGCGGCGCT TTTCCTTGCC
TTCTTTGCGT TTGATGCCAA GGCCCAGCCC GGCACGACCG TGCAGGACCG GCTCGAAGAC
GCATCCCCCA CTCCGGCTGA AAAAATTGCG CTCTTTGATG AGGGGGTCGC CGCTTACGAT
TCAGGCGACT ACGCGAAAGC CTTTGAAATA TGGCTTCCCC TCGCGCAGAC CGACGATCTG
GCGGCGATGC GCAATGTCGC GCTGCTCCTC CGCCGGGGCG ATGGCGTCGC CCGGGATCCG
GAACGGGCGC TTTATTTTTA CGAGCGGGCG GCGCAAGGCG GGCTCACATC GGCGCAGGTC
AACACCGCCT TCATGTATCT CGGCGGCGAA GGCATTCCTC AGGATTACAA AAAAGCGTCC
TTCTGGTTTC ACACGGCGGC CATCGCCGGT GTGCCGGTGG CGCGGTATAA TCTTGGTGTC
CTCTACGAAC GCGGTCTGGG CGTCGAGGCG GATCAGGCGC GGGCGCTCGC CTGGTACGCG
CTGGCGGCAC GTGCAGGTCA TGAAAAAGCT CTCGACCGGC TGACGCAACT GGTACCGAGC
CTGCCCGGCC CCCCACCGCC GGGCGAAACG GAGGCTCCGC TTTCAAAGAC CACCCCAGCG
CCACCGGCAG CGGAAATCGA CCCGTTCGAC GGCCAAACGC CTTAA
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| Protein sequence | MYVCRAAPLP AALFAALFLA FFAFDAKAQP GTTVQDRLED ASPTPAEKIA LFDEGVAAYD
SGDYAKAFEI WLPLAQTDDL AAMRNVALLL RRGDGVARDP ERALYFYERA AQGGLTSAQV
NTAFMYLGGE GIPQDYKKAS FWFHTAAIAG VPVARYNLGV LYERGLGVEA DQARALAWYA
LAARAGHEKA LDRLTQLVPS LPGPPPPGET EAPLSKTTPA PPAAEIDPFD GQTP
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