Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_0787 |
Symbol | |
ID | 5454420 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 853013 |
End bp | 853891 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640876356 |
Product | chaperone DnaJ domain-containing protein |
Protein accession | YP_001412067 |
Protein GI | 154251243 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 0.212048 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCGCGATC CATACGAAAT ACTCGGTCTC GGTCCGGGGG CAGGCAATGC CGAGATCAAG CTCGCCTACC GCAAGCTCGC CAAGCAGCTT CACCCGGACA CTCAGGGTGC GTCTCCGGCA CAGCAGGCCC GCTTTCAGGA AGTGACCGCC GCCTATAATC AGCTCAAGGA CGAAGCCAGC CGGCGCCGTT TCGAAGCCGA GCGTCGCGCC TCCGCCGCCA TGCGCCGCAG ACCGGCTTTT GAGGAGGCAC ACCCCGTATC CGGCTCTCAG GTGCCGCCGG ATGATATCTT CTCCGAACTT TTCGAAGGTA TACGCAGTGC CGGCAAGCGC GTCTTCCGAG CGCGCGGCGA TGATCAGACC TACCGCCTCG CGGTTACATT CCTCGAGGCC GCGAATGGCG CGAAAAAGCG AGTCACGCTC GCCGGCGGGA GAACGCTGGA ACTTGCCGTT CCGCCCGGCA TCGAAAGCGG GAAACAGATA AGGTTGCGGG GCCAGGGGGG CGAAGGTCAT GGCGGCGCGG AAGCGGGCGA CGCCCTGGTC ACGATCGATG TTGAGGCCCA CCCATATTTC CGCCGCGAGG GAAACGACAT TCACCTGACT CTGCCGGTCA CACTGGCCGA AGCCGTCCTC GGCTCGCGAA TAGAGGCGCC AACGGTCGCA GGGCCGGTCA GCCTGTCCGT TCCGGCGGGG TCGAACACTG GAACCCGGCT GCGTCTCAGG GGACGCGGCC TGGCCGGGGA AGGCGGGAAA ACGGGCGATC AGTACGTCAC ATTGTCCGTT ACCCTGCCGG ATGCCGCAGA CGAGGCTTTG CGGGACTTTG CCGCCAATTG GACGGCAGGT CTTAAGTTCA ATCCCCGTAA CGGCTTTTCC GATTCCTGA
|
Protein sequence | MRDPYEILGL GPGAGNAEIK LAYRKLAKQL HPDTQGASPA QQARFQEVTA AYNQLKDEAS RRRFEAERRA SAAMRRRPAF EEAHPVSGSQ VPPDDIFSEL FEGIRSAGKR VFRARGDDQT YRLAVTFLEA ANGAKKRVTL AGGRTLELAV PPGIESGKQI RLRGQGGEGH GGAEAGDALV TIDVEAHPYF RREGNDIHLT LPVTLAEAVL GSRIEAPTVA GPVSLSVPAG SNTGTRLRLR GRGLAGEGGK TGDQYVTLSV TLPDAADEAL RDFAANWTAG LKFNPRNGFS DS
|
| |