Gene Plav_0787 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0787 
Symbol 
ID5454420 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp853013 
End bp853891 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content64% 
IMG OID640876356 
Productchaperone DnaJ domain-containing protein 
Protein accessionYP_001412067 
Protein GI154251243 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value0.212048 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCGATC CATACGAAAT ACTCGGTCTC GGTCCGGGGG CAGGCAATGC CGAGATCAAG 
CTCGCCTACC GCAAGCTCGC CAAGCAGCTT CACCCGGACA CTCAGGGTGC GTCTCCGGCA
CAGCAGGCCC GCTTTCAGGA AGTGACCGCC GCCTATAATC AGCTCAAGGA CGAAGCCAGC
CGGCGCCGTT TCGAAGCCGA GCGTCGCGCC TCCGCCGCCA TGCGCCGCAG ACCGGCTTTT
GAGGAGGCAC ACCCCGTATC CGGCTCTCAG GTGCCGCCGG ATGATATCTT CTCCGAACTT
TTCGAAGGTA TACGCAGTGC CGGCAAGCGC GTCTTCCGAG CGCGCGGCGA TGATCAGACC
TACCGCCTCG CGGTTACATT CCTCGAGGCC GCGAATGGCG CGAAAAAGCG AGTCACGCTC
GCCGGCGGGA GAACGCTGGA ACTTGCCGTT CCGCCCGGCA TCGAAAGCGG GAAACAGATA
AGGTTGCGGG GCCAGGGGGG CGAAGGTCAT GGCGGCGCGG AAGCGGGCGA CGCCCTGGTC
ACGATCGATG TTGAGGCCCA CCCATATTTC CGCCGCGAGG GAAACGACAT TCACCTGACT
CTGCCGGTCA CACTGGCCGA AGCCGTCCTC GGCTCGCGAA TAGAGGCGCC AACGGTCGCA
GGGCCGGTCA GCCTGTCCGT TCCGGCGGGG TCGAACACTG GAACCCGGCT GCGTCTCAGG
GGACGCGGCC TGGCCGGGGA AGGCGGGAAA ACGGGCGATC AGTACGTCAC ATTGTCCGTT
ACCCTGCCGG ATGCCGCAGA CGAGGCTTTG CGGGACTTTG CCGCCAATTG GACGGCAGGT
CTTAAGTTCA ATCCCCGTAA CGGCTTTTCC GATTCCTGA
 
Protein sequence
MRDPYEILGL GPGAGNAEIK LAYRKLAKQL HPDTQGASPA QQARFQEVTA AYNQLKDEAS 
RRRFEAERRA SAAMRRRPAF EEAHPVSGSQ VPPDDIFSEL FEGIRSAGKR VFRARGDDQT
YRLAVTFLEA ANGAKKRVTL AGGRTLELAV PPGIESGKQI RLRGQGGEGH GGAEAGDALV
TIDVEAHPYF RREGNDIHLT LPVTLAEAVL GSRIEAPTVA GPVSLSVPAG SNTGTRLRLR
GRGLAGEGGK TGDQYVTLSV TLPDAADEAL RDFAANWTAG LKFNPRNGFS DS