| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0785 |
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| Symbol | |
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| ID | 5456810 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 850882 |
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| End bp | 851979 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640876354 |
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| Product | chorismate synthase |
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| Protein accession | YP_001412065 |
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| Protein GI | 154251241 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0082] Chorismate synthase |
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| TIGRFAM ID | [TIGR00033] chorismate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 0.229169 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCACA ATACGTTCGG CCATCTGTTC CGCGTCACGA CCTGGGGCGA AAGCCACGGG
CCGGCGCTCG GCTGCGTTGT GGACGGTGCG CCGCCGCGGC TGCCTTTGAA GGCCGAAGAT
ATCCAGCAAT GGCTCGACCG GCGCAAACCC GGCCAGTCGC GGTTCACCAC GCAGCGGCGC
GAGCCCGATG CGGTGAAAAT TCTCTCGGGC ACCTTCGTCG AAGACGGCAT AGAGATGACG
ACGGGCACGC CGATCTCGCT GATGATCGAG AATGTCGATC AGCGGTCGAA GGACTATGGC
GATATCGTCG AGAAGTTCAG ACCGGGCCAT GCCGATCTCA CCTATTTCCT GAAATATGGC
ATTCGCGATT ATCGCGGGGG CGGCCGCTCT TCGGCGCGTG AAACGGCGGC CCGCGTGGCT
GCCGGCGCGG TGGCGCGGGC GATGTTGCCG GAGATGATGA TCCGGGGTGC GCTCGTGCAG
ATGGGGCCGC ACAAGATCGA CCGCGCCAAC TGGGACTGGA ACGAGGTGGG AAACAACCCC
TTCTGGTGCC CGGACGCAAA GGCAGCGGCG GAATGGGAAA TCTATCTCGA TAGCGTCCGG
AAAGCCGGTT CGTCCTGCGG TGCCGTCATC GAGATTGTAG CCAGCGGCGT ACCCGCCGGT
CTCGGCTCAC CTATCTACGG AAAGCTCGAT GCGGAACTTG CAAGCGCGTT GATGAGCATA
AACGCGGTGA AGGGTGTCGA GATCGGAGAT GGCTTCGGCG CTGCCGCTCT CTCCGGCGAA
GAAAATGCCG ACGAGATGCA GTCGGGGCCG CATGGCATTG AGTTCAGCTC CAATCACGCG
GGCGGCGTTC TTGGCGGCAT TTCCACGGGA CAAGATGTCG TCGCGCGCTT TGCCGTGAAA
CCCACTTCCT CGATCCTCAG CCCTCGCAAA ACAGTCACCA AAGGCGGCGA CGACACGGAA
ATCGTCACCA AGGGCCGCCA TGACCCATGC GTCGGCATCC GCGCCGTGCC TGTGGGCGAA
GCGATGATGG CCTGCGTGCT TGCTGACCAG CTGCTCCGCC ATCGGGCGCA GATGGGCGGG
AGCGGCCGCA ATGAGTGA
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| Protein sequence | MSHNTFGHLF RVTTWGESHG PALGCVVDGA PPRLPLKAED IQQWLDRRKP GQSRFTTQRR
EPDAVKILSG TFVEDGIEMT TGTPISLMIE NVDQRSKDYG DIVEKFRPGH ADLTYFLKYG
IRDYRGGGRS SARETAARVA AGAVARAMLP EMMIRGALVQ MGPHKIDRAN WDWNEVGNNP
FWCPDAKAAA EWEIYLDSVR KAGSSCGAVI EIVASGVPAG LGSPIYGKLD AELASALMSI
NAVKGVEIGD GFGAAALSGE ENADEMQSGP HGIEFSSNHA GGVLGGISTG QDVVARFAVK
PTSSILSPRK TVTKGGDDTE IVTKGRHDPC VGIRAVPVGE AMMACVLADQ LLRHRAQMGG
SGRNE
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