| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0782 |
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| Symbol | |
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| ID | 5455319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 848389 |
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| End bp | 849132 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640876351 |
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| Product | hemolysin A |
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| Protein accession | YP_001412062 |
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| Protein GI | 154251238 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1189] Predicted rRNA methylase |
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| TIGRFAM ID | [TIGR00478] hemolysin TlyA family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.705494 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 0.486416 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGAAGG AAAAACGCCG TCTGGATATC GCTCTCCTTG AGCGCGGTCT TGCATCCACG
CGTGCCCGCG CACAGGCGGC CATCAAGGCC GGGCATGTCC GGGTGGCCGG TGAAATTGCA
ACCAAACCTG CCGATCTCGT CGCCCCTGAA GCCGAGATCT CCATGCTTGC CCCCGAACAT
CCATATGTTT CGCGTGGCGC GCTGAAGCTT GTTCATGCGC TTGACCACTT CGGCATCGAT
CCGTCGGGCT CTCTCTGCCT TGATCTCGGC GCCTCTACCG GCGGTTTCAC GGAAGTTCTG
CTGGAGCGCG GCGTCGCCTC AGTCGTCGCT ATTGACGTCG GGCACGGCCA GCTCGCGGAA
AAAATTGCGC AAGACACCCG TGTCCGCGCG ATTGAAGGAC TGAACGCAAA GGATATCTCG
CGTGACATTG TCCCCGGCCG GATCGATCTG ATCGTGGCGG ATCTCAGCTT CATCAGTCTT
GAAAAAGCGC TGCCGCCGGC GCTCGCGCTC GCCGAGCGCG GCGCCCGGCT GATCGCGCTC
ATCAAGCCGC AGTTCGAGGT CGGCCCCGAA AATGTCGGCA AAGGGGGTAT TGTCCGCGAG
CCGGCGTTGC ATGAGCGTGT CTGTGCCAAT ATTGCGGGCT GGTTGGAAAA GATGGGATGG
CGCGTGGAAG GCATTGTCGA GAGCCCGATA AAGGGCGGTG ACGGAAACCG CGAGTTCCTG
ATTGCGGCCT GCCATGACCG CTGA
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| Protein sequence | MVKEKRRLDI ALLERGLAST RARAQAAIKA GHVRVAGEIA TKPADLVAPE AEISMLAPEH
PYVSRGALKL VHALDHFGID PSGSLCLDLG ASTGGFTEVL LERGVASVVA IDVGHGQLAE
KIAQDTRVRA IEGLNAKDIS RDIVPGRIDL IVADLSFISL EKALPPALAL AERGARLIAL
IKPQFEVGPE NVGKGGIVRE PALHERVCAN IAGWLEKMGW RVEGIVESPI KGGDGNREFL
IAACHDR
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