| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0764 |
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| Symbol | |
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| ID | 5456170 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 829247 |
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| End bp | 830029 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640876333 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001412044 |
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| Protein GI | 154251220 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0166508 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTATA AACCGTTCGA TCTTTCAGGA AAGGTTGCGC TCGTCACCGG CGGCAATGGC
GGCATCGGCC TCGGCATGGC GGACGCCATT GCGCAATCTG GCGCGGACAT TGCCATCTGG
GGCACGAATG AAGACAAGAA CAAGCGCGCC GCCGAGCAGC TGCGCGCGCA TGGCGTGAAA
GTCTATACGC GCAAAGTCGA CGTGTCGGAC GAGGCCCAGG TCGTGGACGG GATCGGCGCG
ACGGTGAAGG AACTCGGGCG CATCGACAGC GTCTTCGCGA ATGCCGGCGT CGGCTTCGGC
GCGCCGTCCT TCATCGGGAT GACGACCGAG ACCTATCGCA AGACGCTGGC CGTCAATCTC
GACGGCGTGT TCTTCACGCT GCGCGAGGCG GCGCGGCACA TGGTGGACCG CGCGAAGGCC
GGCGATGCGG GCGGCTCTCT CGTCGGCATC GCAAGCCTTG CCGCCATCGA AGGCGCGGCG
CGGAACGAAG CCTATGCGGC GACCAAGGGC GGCGTCATCT CCATGATCAA GAGCATCGCG
GTCGAACATG CGCGCTACGG GATGCGGGCG AACGCCATCC TGCCGGGCTG GATCGCGACC
GACATGACGG CGCAGGCGCA GGCGGCGCCG GCCTTCGCGG AAAAGGTCAT CCCGCGCGTG
CCGGCCAGGC GCTGGGGCGA GCCGGGCGAT TTCGGCGGCG TGGCGGTCTA TCTCACGTCG
GATGCTTCGT CCTATCATTC GGGCGACACT TTTGTGATCG ACGGCGGCTA CGCCATTTTC
TGA
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| Protein sequence | MSYKPFDLSG KVALVTGGNG GIGLGMADAI AQSGADIAIW GTNEDKNKRA AEQLRAHGVK
VYTRKVDVSD EAQVVDGIGA TVKELGRIDS VFANAGVGFG APSFIGMTTE TYRKTLAVNL
DGVFFTLREA ARHMVDRAKA GDAGGSLVGI ASLAAIEGAA RNEAYAATKG GVISMIKSIA
VEHARYGMRA NAILPGWIAT DMTAQAQAAP AFAEKVIPRV PARRWGEPGD FGGVAVYLTS
DASSYHSGDT FVIDGGYAIF
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