| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0762 |
|---|
| Symbol | |
|---|
| ID | 5455718 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | - |
|---|
| Start bp | 827484 |
|---|
| End bp | 828686 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640876331 |
|---|
| Product | L-lactate dehydrogenase (cytochrome) |
|---|
| Protein accession | YP_001412042 |
|---|
| Protein GI | 154251218 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.109477 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 56 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAGAGGG AGAGCGAGGT GAAGGGCCGT CTCACGGGGA GGAACGTCAT GAGTCTCAAT
CTCAATCCGG TATCGGTTTC GGACTACCGG GAGCTGGCGC GGCGGCGGTT GCCGACGCAG
TTGTTCGATT ACATCGATGG CGGCTCCTAT GCGGAGGCGA CGCTGGACGA CAATGTGGCG
GCGTTCCGGC GGCTGAAGCT TCGCCAGCGG GTGCTGCGCG ATGTATCGAC CATCGACACA
TCGGCGGAGA TCTTCGGGAC GCAATGGAAG ATACCGGCGG CGCTGGCGCC TGTGGGCTTT
GCGGGCATGT ATGCGCGGCG CGGCGAGGTG CAGGCGGCGA AGGCGGCGGA AAAATTCGGC
GTGCCGTTCA CGCTTTCCAC CGTCGGCATC TGCGCGATCG AGGAAGTGGC GAAGGCGACG
AGCGTGCCTT TCTGGTTTCA GCTCTATGTC ATCAAGGACC GGGGCTATGC CCGCGCGCTG
ATGCAACGCG CGCATGAGGC GGGATGCCCG GTGCTCGTGT TCACGGTCGA CCTCGCCGTG
CTCGGCGCGC GCTACCGCGA CACACGCAAC GGCATGAACA CGGCAATGTC GCTCGGCAAG
AAGCTGAAGG TGGCGATGGA TTTCGCGAAG CGGCCGGGCT GGATCCGCGA CGTGGCGCTG
GGCGGCAAGC CGCTCGATTT CGGAAATTTG CGCGAGGCGG TGCCGAATGC GCGCGGCTTC
GGCGAATTCG GCGCGTGGGT CGCGCAGAAC CTCGACCCGG CCATGACGTG GAAAGACCTC
GAATGGGTGC GCGCGAACTG GCCGGGTAAA ATCATCATCA AGGGAGTGAT GGACCGCGAG
GATGCGCGGC TCGCGATGGC GGAAGTGGCA CCCGAAGGCA TTGTCGTTTC CAACCATGGC
GGGCGGCAGC TCGACGGGAC GCCGGCGACG CTCGACGCGC TGCCCGCGAT CCGCGAGGAA
GTGGGCGACA GGACGGTGCT TCTGCTCGAT GGCGGCATCA GGAGCGGGCT CGACATCGTG
AAGGCGAGAG CGAGGGGGGC GGATGCCTGC CTGCTCGGCC GCGCCTGGGC CTTTGCGCTG
GCGGCGCAGG GGGAAGCGGG CGTGAAGGCG ATGCTCGGCA CGATGCGGCA GGAAATGCAT
GTGGCGCAGG CACTGACGGG ATTTACGCGG GCGCGGGATA TCGACAGCAG CGCGATTGCG
TGA
|
|---|
| Protein sequence | MERESEVKGR LTGRNVMSLN LNPVSVSDYR ELARRRLPTQ LFDYIDGGSY AEATLDDNVA
AFRRLKLRQR VLRDVSTIDT SAEIFGTQWK IPAALAPVGF AGMYARRGEV QAAKAAEKFG
VPFTLSTVGI CAIEEVAKAT SVPFWFQLYV IKDRGYARAL MQRAHEAGCP VLVFTVDLAV
LGARYRDTRN GMNTAMSLGK KLKVAMDFAK RPGWIRDVAL GGKPLDFGNL REAVPNARGF
GEFGAWVAQN LDPAMTWKDL EWVRANWPGK IIIKGVMDRE DARLAMAEVA PEGIVVSNHG
GRQLDGTPAT LDALPAIREE VGDRTVLLLD GGIRSGLDIV KARARGADAC LLGRAWAFAL
AAQGEAGVKA MLGTMRQEMH VAQALTGFTR ARDIDSSAIA
|
|---|
| |