| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0748 |
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| Symbol | |
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| ID | 5455823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 813481 |
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| End bp | 814431 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640876317 |
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| Product | glycine cleavage T protein (aminomethyl transferase) |
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| Protein accession | YP_001412028 |
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| Protein GI | 154251204 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0354] Predicted aminomethyltransferase related to GcvT |
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| TIGRFAM ID | [TIGR03317] folate-binding protein YgfZ |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.642058 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCATG CGGGGCCTAC ATCTGGTGCC TGGAACGAAA CGAGGCAGGA CATGACAGGG
GCGTTGGCCT CGGCGCTTTC GAAGCGCGGG GTTCTGAGGG TCGCGGGCCC GGAGGCGCGG
AGCTTCCTGC AGGGGCTGGT CACCAATAAT GTCGATCTCG CGACCGGCAT GACGGCCATC
TATGCCGCCT TGCTGACGCC GCAGGGCAAA TTCCTTCTCG ACTTCTTCAT AGCCGCCGAC
CCGGCCGACA AGGACGCGGT GCTGCTGGAT TGCGACGGCG CGCGGGCGGA GGCGCTGATG
AAGCGGCTCA CCATGTATAA ATTACGCGCC AAGGTGACGA TCGAAGACCT GAGCGAGAAG
CTGGCGGTGC TGGCGCTGTG GAACGAGGAC GGGAGCCCGC TCACCGAAGG GCCGGGCTTT
GCGGATCCCC GGCTTCCGGG CATGGGACGG CGGGCGATCC TGGCTTCCGG CGAGGTAGGG
AAGGCGATTT CGGCGGCGAA AGCGCGGGAA GCAGGCGAGG ATGAGTACCA CCGGCTGCGA
ATAATGCATG GGGTGGGCGA TGCCGCGCAG GATTTTGAAC CGGACCGGAC CTTTCCTCTC
GAGGTGAATA TAGCCGAGCT TAACGGAATC GACTTCCACA AGGGCTGCTT CGTCGGACAG
GAAGTGACGT CGCGGACGAA GCGGCGCGGC AGTGTGCGCA AACGGCTGCT GCCCGCGCAT
GTGGAAGGCG ATATGCCGCC GCATGGCACG CAGGTGAAGG GCGTGGCGCG CGAGGTGGGC
ACCATCCTTT CGGGCGACGC GGAAACATCG CGGGTGCTGG CGCTGCTTCG GCTGGACCTC
ATTCGCGGCT CTGTGCTGGA AGCGGGATAT GCCGAAATCC GGCCGGAAGT GCCGTCGTGG
CTGCATATCG ATCTCGATGG CAGCGAAGAG GAAGCGGCCG ATGGCGAATA A
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| Protein sequence | MAHAGPTSGA WNETRQDMTG ALASALSKRG VLRVAGPEAR SFLQGLVTNN VDLATGMTAI
YAALLTPQGK FLLDFFIAAD PADKDAVLLD CDGARAEALM KRLTMYKLRA KVTIEDLSEK
LAVLALWNED GSPLTEGPGF ADPRLPGMGR RAILASGEVG KAISAAKARE AGEDEYHRLR
IMHGVGDAAQ DFEPDRTFPL EVNIAELNGI DFHKGCFVGQ EVTSRTKRRG SVRKRLLPAH
VEGDMPPHGT QVKGVAREVG TILSGDAETS RVLALLRLDL IRGSVLEAGY AEIRPEVPSW
LHIDLDGSEE EAADGE
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