Gene Plav_0737 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0737 
Symbol 
ID5454792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp803124 
End bp803672 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content66% 
IMG OID640876306 
Producthypothetical protein 
Protein accessionYP_001412017 
Protein GI154251193 
COG category[R] General function prediction only 
COG ID[COG5350] Predicted protein tyrosine phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.987787 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value0.752042 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTATG TAAGCCCCCT CAGTGCGGTC GAGGATGCGA TCCGCGAAGT GCGGCCCTCG 
CATCTCGTGA GCCTGCTCGA CCCCGAAACG ATGATCGGTA CGCCGGAGGG CATCCTGCCC
GACCGGCACC TGCGGATCGG CATCAACGAC ATCGCGGAAG CGATCGACGA TCTCGTGCCG
CCGGGCACCG AGCATGTGTC CGCGCTGATC GATTTCGTGC GCGGGTGGGA CCAGCGCCAG
CCCCTGCTGG TTCACTGTTG GGCCGGGATC AGCCGGTCCA CGGCTGCCGC CTTCATCACG
CTTTGCGCAT TGAACGAAGA ACACCCCGAG GACGAACTCG CGCAGCTTGT GCGCAGTTGC
GGTTCCCACG CACACCCCAA CCGGCTGATG GTCAAGCTGG CGGATGAACT GCTCGCCCGC
GAGGGACGCA TGTCGGCGGC CGTGGAGGCG CTCGGACCGG GACGCGCCTG TTGGGAAGGC
GAACTTTTCG CGATCCCACT GCGCCCCGCT GATGACCTTT CGACAGCCCG CTTCCCGCGA
AGCCGCTGA
 
Protein sequence
MIYVSPLSAV EDAIREVRPS HLVSLLDPET MIGTPEGILP DRHLRIGIND IAEAIDDLVP 
PGTEHVSALI DFVRGWDQRQ PLLVHCWAGI SRSTAAAFIT LCALNEEHPE DELAQLVRSC
GSHAHPNRLM VKLADELLAR EGRMSAAVEA LGPGRACWEG ELFAIPLRPA DDLSTARFPR
SR