| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0729 |
|---|
| Symbol | |
|---|
| ID | 5457011 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | + |
|---|
| Start bp | 793012 |
|---|
| End bp | 795780 |
|---|
| Gene Length | 2769 bp |
|---|
| Protein Length | 922 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640876298 |
|---|
| Product | pyruvate phosphate dikinase |
|---|
| Protein accession | YP_001412009 |
|---|
| Protein GI | 154251185 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0574] Phosphoenolpyruvate synthase/pyruvate phosphate dikinase |
|---|
| TIGRFAM ID | [TIGR01828] pyruvate, phosphate dikinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.378148 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 61 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTTTGAAG TGAAGGCCCT GGCTCTGTGG CCGGGCTTTC GTGTGACGGC CAAACCAAAG
GCGAGTGCGA TGGCTGAGAA GAAGTGGGTT TATTCCTTCG GCGACGGCAA GGCGGAAGGC
GCGGCGAAGT TGCGCGACCT TCTGGGCGGC AAGGGCGCGA ACCTTGCCGA GATGTCGAAT
ATTGGCCTGC CGGTGCCGCC CGGCTTCACC ATCACCACGG AAGTCTGCAC CGCCTTTTAT
GAAAACGACC GCGCCTTTCC CGCCGGACTG AAGGAACAGG TCGAGAAGGC ACTCGCCGAT
ATCGGCAATT CGGTCGGCGC GCATTTCGGC GATGCCGCGA ACCCGCTTCT CGTTTCCGTG
CGCTCCGGCG CGCGCGCTTC CATGCCCGGC ATGATGGACA CGGTGCTGAA CCTCGGCCTC
AACGACGAGA CGGCGGCGGG CCTCGGCAAG CGCGCGGGCG ACGAACGCTT CGCCTATGAC
AGCTATCGCC GTTTCATCTC GATGTATTCG GATGTGGTGC TCGGCGTCGA GCATCACAAT
TTCGAGGAGA TACTGGAGTA CTTCAAGGAA GAGCAGGAAT ATTCGCTCGA CACGGAGCTC
TCCGCCGACG ACTGGAAGAA CGTCATCGCG CGCTACAAGG AGCGCGTGCA GGAAGAGCTG
GGCAAGCCCT TCCCCCAGGA TGTGAACGAG CAGATCTGGG GCGCGATCGG CGCTGTATTC
GGTTCGTGGC GCAACCGCCG TGCGGAAACC TATCGCCGCC TCCACAACAT TCCCGAAAGC
TGGGGCACCG CCGTCAACAT CCAGGCGATG GTGTTCGGCA ATATGGGCGA CACGAGCGCC
ACGGGCGTTG CCTTCACGCG CAATCCCTCG ACCGGCGAGA AGGCCTATTA CGGCGAGTTC
CTCGTCAATG CTCAAGGCGA GGACGTGGTG GCAGGCATTC GCACGCCGCA AAGCCTGACC
AAAAAGGCGC GCCTCGAAGG CAACGACAAG AAGCCCTCGA TGGAAGAAGC AATGCCGGAC
GCATTCGCGG AACTGGCGGC GACATTCGAG CGGCTTGAGA AGCACTACAC GGACATGCAG
GACGTGGAAT TCACCGTGCA GGAAGGCAAG CTCTGGATGC TGCAGACGCG GAGCGGAAAG
CGCACGGCGA AAGCGGCATT GAAGATCGCC GTCGAAATGG TGGGCGAAGG GCTGATCGAC
GAGAAGACGG CGATCGGCCG CGTCGATCCC GCCTCGCTCG ATCAACTCCT GCATCCGACG
CTCGACCCCG ATGCGCCGCG CGATGTATTG GCGACGGGCC TGCCCGCCTC GCCCGGCGCG
GCGTCTGGCA CGGTCGTCTT CAATTCCGAC GAAGCCGCCG CCATGCGGCA GGCGGGCAAG
GACGTCGTAC TCGTGCGCGT CGAGACGAGC CCGGAAGACA TCAACGGCAT GCATTCCGCT
GTCGCGATCC TGACGACGCG CGGCGGCATG ACGAGCCACG CGGCCGTCGT CGCGCGCGGC
ATGGGGCGGC CTTGCGTCTC CGGCGCGGGC TCCATCCGCA TCGACTACAA GACCGAGACG
TTCACGGCCT CGGGCGTCAC CGTGAAGAAG GGCGACATCA TTACGGTGGA CGGCTCGACC
GGGCAGGTCC TCAAGGGACA GATACCGACG TTGCAGCCGG AACTCTCCGG CGATTTCGCG
ACATTGATGA CATGGGCGGA CAAATATCGC CGCATGCAGG TGCGCACCAA CGCCGAAACG
CCGCATGACG CGGAAACAGC GCGCAAGTTC GGCGCCGAAG GCATCGGCCT CTGCCGTACC
GAACACATGT TCTTCGACGA GGACCGCATC GTCGCCGTGC GCCAGATGAT CCTCGCCGAT
GACGCGAAGG GACGCCGCGC GCCGCTTGAG AAAATCCTGC CGATGCAGCG CGACGATTTC
CGTCAGTTGT TCGAGATCAT GCAAGGCTTG CCGGTGACGA TCCGCCTGCT CGATCCGCCG
CTGCATGAAT TCCTGCCGAA GGGCGACGAG GAAATCGCGC AGGTGTCGGA AGATACCGGC
ATTCCGGCCG ACAAGCTGAC GCGGCGCCTC GCGGAACTCG CGGAGACGAA CCCGATGCTT
GGTCATCGCG GTTGCCGCCT CGGCATTTCC TATCCCGAGA TCTACGAGAT GCAGGCACGC
GCGATTTTCG AGGGCGCGCT TCTCGCGGCA AAGGAAACGG GCGCCCCGGT GATCCCCGAA
ATCATGATCC CGCTTGTCGG CATGAAGACC GAACTCGACT TCCTCAAGGC GCGCGTCGTG
GCGGTGGCCG CGGAAGTTGA AAAGGAACAG GGAAAGAAGC TCGAATATTC CGTCGGCACC
ATGATCGAGC TGCCACGCGC GGCGCTGATG GCGCGTGAAA TCGCCGCCTC CGCCGAGTTC
TTTTCCTTCG GCACCAACGA CCTGACACAG ACGACCTTCG GCATCAGCCG CGACGATGCC
GCGCAGTTCA TGAATGATTA TCTGGGCAAG AAAATCCTGA CCCAGGATCC CTTCGTTTCG
CTCGATATCG ACGGTGTGGG CGAGCTTGTG CGTCTTGCAG CGGAGCGGGG CAGGGCGGCA
CGGCCCGACA TCAAGCTCGG CATCTGCGGC GAACATGGCG GCGACCCGGC ATCCATCGCC
TTCTGCGAGG AGGTGGGCCT CTCCTATGTC TCCTGCTCGC CCTACCGGGT GCCGATCGCA
CGTCTCGCAG CTGCACAATC GGCTCTTGCC GTTGCGTCAG GTGCGGCGCA AGGCAGCGGC
ACCGCCTGA
|
|---|
| Protein sequence | MFEVKALALW PGFRVTAKPK ASAMAEKKWV YSFGDGKAEG AAKLRDLLGG KGANLAEMSN
IGLPVPPGFT ITTEVCTAFY ENDRAFPAGL KEQVEKALAD IGNSVGAHFG DAANPLLVSV
RSGARASMPG MMDTVLNLGL NDETAAGLGK RAGDERFAYD SYRRFISMYS DVVLGVEHHN
FEEILEYFKE EQEYSLDTEL SADDWKNVIA RYKERVQEEL GKPFPQDVNE QIWGAIGAVF
GSWRNRRAET YRRLHNIPES WGTAVNIQAM VFGNMGDTSA TGVAFTRNPS TGEKAYYGEF
LVNAQGEDVV AGIRTPQSLT KKARLEGNDK KPSMEEAMPD AFAELAATFE RLEKHYTDMQ
DVEFTVQEGK LWMLQTRSGK RTAKAALKIA VEMVGEGLID EKTAIGRVDP ASLDQLLHPT
LDPDAPRDVL ATGLPASPGA ASGTVVFNSD EAAAMRQAGK DVVLVRVETS PEDINGMHSA
VAILTTRGGM TSHAAVVARG MGRPCVSGAG SIRIDYKTET FTASGVTVKK GDIITVDGST
GQVLKGQIPT LQPELSGDFA TLMTWADKYR RMQVRTNAET PHDAETARKF GAEGIGLCRT
EHMFFDEDRI VAVRQMILAD DAKGRRAPLE KILPMQRDDF RQLFEIMQGL PVTIRLLDPP
LHEFLPKGDE EIAQVSEDTG IPADKLTRRL AELAETNPML GHRGCRLGIS YPEIYEMQAR
AIFEGALLAA KETGAPVIPE IMIPLVGMKT ELDFLKARVV AVAAEVEKEQ GKKLEYSVGT
MIELPRAALM AREIAASAEF FSFGTNDLTQ TTFGISRDDA AQFMNDYLGK KILTQDPFVS
LDIDGVGELV RLAAERGRAA RPDIKLGICG EHGGDPASIA FCEEVGLSYV SCSPYRVPIA
RLAAAQSALA VASGAAQGSG TA
|
|---|
| |