Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_0719 |
Symbol | |
ID | 5453433 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 781763 |
End bp | 783436 |
Gene Length | 1674 bp |
Protein Length | 557 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640876288 |
Product | electron-transferring-flavoprotein dehydrogenase |
Protein accession | YP_001411999 |
Protein GI | 154251175 |
COG category | [C] Energy production and conversion |
COG ID | [COG0644] Dehydrogenases (flavoproteins) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.136312 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 69 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGACC AGGCGGCAGT CGAACGCGAA TACATGGAAT ATGACGTCGT CATCGTCGGC GGCGGCCCGG CGGGCCTTTC GGCGGCGATC CGCCTGCGGC AACTGGCGGC GGAGGAGGAT TTCGACATTT CGGTCTGCGT GATCGAAAAG GGCTCCGAAA TCGGCGCACA TATCCTGTCG GGCGCGGTGA TGGACCCGAT CGGTCTCGAC ACGCTGCTGC CCGACTGGCG CAACATGGGC GCCCCGGTGG ATACGGAAGT GACGGCCGAC CATTTTATCT ATCTCGGCCC GGCCGGCGGC ATCCGCATCC CGAATTTCCT GTTCCCGCCG CTGATGAACA ATCACGGCAA TTATATCGGC AGCCTCGGCA ATCTGTGCCG CTGGCTCGCC GAACAGGCCG AAGGGCTCGG CGTCGAAATC TATCCGGGCT TCCCGGGCGC GGAAGTGCTT TACGACGATG AAGGCGCGGT GCGCGGCGTC GTCACCGGCG ACATGGGCGT GGCGCGGGAT GGCAGCCACA AGGACAGCTA CACGCCGGGA ATGGAACTGC GCGGCAAGTA CACGCTCTTC GCCGAAGGTG TGCGCGGTTC GCTGTCGAAG GAGCTGATCC GCAAATTCAA GCTGGACGAA GGGCGCGAGC CGCAGAAATT CGGCATCGGC CTGAAGGAAT TGTGGGAGGT CGAGCCTTCC AAGCACAAGA AGGGCCTTGT GCAGCACACG ATGGGCTGGC CGCTCGACAA TTCGACCGGC GGCGGCTCGT TCCTCTATCA CTTCGGCGAG AACCTCGTTT CGGTCGGCTT CGTGCTGCAC CTGAACTACA AGAACCCCTA TCTCTCGCCC TTCGACGAGT TCCAGCGCTT CAAGCATCAT CCGTCGATCG TCGACACTTT TGTCGGCGGC AAGCGCATCG CCTATGGCGC GCGCGCCATC ACCGAAGGCG GTTTCCAGTC CGTGCCGAAG CTCACCTTCC CCGGCGGCGC GCTGATCGGC TGCTCGGCCG GTTTCGTCAA CGTGCCGCGC ATCAAGGGCA GCCATAACGC GATCCTGACC GGCATCATGG GCGCCGACGC GGCCTTCGAG GCGGTGAAGG ACGGACGCCA GGGCGACGAA CTGACGAGCT ATACGGAAGC CTACGAACAG AGCGCGGTCT ACAAGGACCT GAAGCGCGTC CGCAACGTGA AGCCGCTCTG GTCGAAGCTC GGCACCTTCA TCGGCATCGG CCTCGGCGGC ATCGACATGT GGATGAACAA TCTCGGGATA GGCCTGCCTT TCACGCTGCG GCACAAGAAG GCGGATTTCG AGTCGATCAA GAAGGCAAGC GAGTGCAAGC CGATTGCCTA TCCGAAGCCC GACGGCAAGA TCTCCTTCGA CAAGCTCTCT TCCGTTTTCC TCTCGGCGAC CAACCACGAG GAAGACCAGC CGGTCCATCT GAAGCTGAAG GACCCGGCAA TCCCGATCGC CTACAACCTG CCGATGTATG ACGAGCCGGC GCAGCGCTAT TGCCCGGCAC AGGTCTATGA GGTGGTGCGG GACGATGACG GCTCCAATCC GCGCTTCCAG ATCAATGCGC AGAACTGCGT CCACTGCAAA ACCTGCGACA TCAAGGACCC GGCCCAGAAC ATCAACTGGA CGGTGCCGGA AGGCGGCGGC GGCCCGAATT ACCCGAATAT GTGA
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Protein sequence | MSDQAAVERE YMEYDVVIVG GGPAGLSAAI RLRQLAAEED FDISVCVIEK GSEIGAHILS GAVMDPIGLD TLLPDWRNMG APVDTEVTAD HFIYLGPAGG IRIPNFLFPP LMNNHGNYIG SLGNLCRWLA EQAEGLGVEI YPGFPGAEVL YDDEGAVRGV VTGDMGVARD GSHKDSYTPG MELRGKYTLF AEGVRGSLSK ELIRKFKLDE GREPQKFGIG LKELWEVEPS KHKKGLVQHT MGWPLDNSTG GGSFLYHFGE NLVSVGFVLH LNYKNPYLSP FDEFQRFKHH PSIVDTFVGG KRIAYGARAI TEGGFQSVPK LTFPGGALIG CSAGFVNVPR IKGSHNAILT GIMGADAAFE AVKDGRQGDE LTSYTEAYEQ SAVYKDLKRV RNVKPLWSKL GTFIGIGLGG IDMWMNNLGI GLPFTLRHKK ADFESIKKAS ECKPIAYPKP DGKISFDKLS SVFLSATNHE EDQPVHLKLK DPAIPIAYNL PMYDEPAQRY CPAQVYEVVR DDDGSNPRFQ INAQNCVHCK TCDIKDPAQN INWTVPEGGG GPNYPNM
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