| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0712 |
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| Symbol | mscL |
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| ID | 5455553 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 772078 |
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| End bp | 772506 |
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| Gene Length | 429 bp |
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| Protein Length | 142 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640876281 |
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| Product | large-conductance mechanosensitive channel |
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| Protein accession | YP_001411992 |
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| Protein GI | 154251168 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1970] Large-conductance mechanosensitive channel |
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| TIGRFAM ID | [TIGR00220] large conductance mechanosensitive channel protein |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.268263 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 68 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTCAAGG AATTTCGCGA GTTCGCCCTC AAGGGCAATG TGCTCGACAT GGCGGTCGGC
ATCATCATCG GCGCCGCCTT CACCACCATC GTGCAGTCGC TGGTCAACGA CATCATCATG
CCGCCCGTCG GCGTGCTCAT GGGCGGGGTC GACTTCACCG ATTATTTCAT CGCGCTCACA
TGGAGCGATG TCGCGCCCGT TTCGGTCGAT GCCGCGAAGG AAGCCGGCAT TCCGGTCATC
GCCTATGGCC GCTTCATCAA CGCCGTCATC CAGTTCGCGA TCGTCGCCTT CGCGCTCTTC
CTCGTCATCC GCCAGATGAA CCGCCTCAAG GCGCGCATTG CGAAAGGCGA AGCCCCCGCC
CCTGCCGCCC CGCCGCGCCA GGAAGTGCTG CTGGAAGAAA TCCGCGACGC GCTACGGGCG
AAGGGCTGA
|
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| Protein sequence | MFKEFREFAL KGNVLDMAVG IIIGAAFTTI VQSLVNDIIM PPVGVLMGGV DFTDYFIALT
WSDVAPVSVD AAKEAGIPVI AYGRFINAVI QFAIVAFALF LVIRQMNRLK ARIAKGEAPA
PAAPPRQEVL LEEIRDALRA KG
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