Gene Plav_0709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0709 
Symbol 
ID5454254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp770807 
End bp771406 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content69% 
IMG OID640876278 
Producthypothetical protein 
Protein accessionYP_001411989 
Protein GI154251165 
COG category[S] Function unknown 
COG ID[COG3222] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0571973 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCTCG ATCCGCAACT TGTCATCATG GCGAAGACGC CGCTGATCGG CCGTGTGAAG 
ACGCGGCTGG CGCGGGACGT GGGCGGCGTC GAGGCGCTGC GTTTTTTTCG CGGGGCGAGC
ACGGGGCTGA TCCGGCGCGT CGGCAACGAT CCGCGCTGGC GGACCCTGCT GGCGCTGGCG
CCCGACCGGG CGGTGCATGA GAAGGGCATC TGGCCGGAGG GCATTCCCCG CATCGCGCAA
GGGCAGGGCG ATCTCGGCCA CCGCATGGGA CGGCTCTTCC GCGACCTGCC GCCGGGGCCG
GTGGTAATCG TCGGTGCGGA TATTCCGGGC ATCGGCGCGG CCCAAGTGGC CGCCGCCTTC
GCGGCGCTGG GGCGGCACGA CGCCGTGTTC GGCCAGGCGG AGGATGGCGG CTACTGGCTG
GTGGGGCTGA AGCGGCGGCC GCGTGTCCTG GATATTTTCG AGGGCGTGCG CTGGTCGAGC
GAATATGCGC TGGCGGACAC CGTGAAGAAT GTCCGTAGGC AGAGCATGAG CGTGGCGATG
CTGGAAAGCC TGCCGGACAT CGACACGGGC GCGGATTACG CCAAGTGGAA GCGCGGGTGA
 
Protein sequence
MSLDPQLVIM AKTPLIGRVK TRLARDVGGV EALRFFRGAS TGLIRRVGND PRWRTLLALA 
PDRAVHEKGI WPEGIPRIAQ GQGDLGHRMG RLFRDLPPGP VVIVGADIPG IGAAQVAAAF
AALGRHDAVF GQAEDGGYWL VGLKRRPRVL DIFEGVRWSS EYALADTVKN VRRQSMSVAM
LESLPDIDTG ADYAKWKRG