Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_0707 |
Symbol | |
ID | 5453631 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 768698 |
End bp | 769963 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640876276 |
Product | radical SAM domain-containing protein |
Protein accession | YP_001411987 |
Protein GI | 154251163 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1533] DNA repair photolyase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0399019 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 69 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCTCAT GCTGCGCTAT ACTCATTTCC ATGACGATGA GTCGCGACAT AGCGCCCCCC GGCCGCCCCG TCCGCGCAAA TGCCAATTCC CCGGTTGGCG CGCGTGACGT TCAGCGGTCC CGCGGGCTCC CGGACCACAG CCCCTCCCCC CGTGGGGCCG CCCTCGTACC CCCGAGCGTC CGCGAGCCTA TTCTGCCCGA GAGCGGCCGC CGCGGCCGGG GCGCGCTTAC CAACAAGAGC GGCCGTTACG AGCCGCAGTC CCGCACGGTG CTCGATGATG GCTGGGACAC GATCGAGGAG GCGCCGCCGC CCCTCAAGAC CCATGTGACG GAAGAGACCG CGCGCCACAT CATCACGCGC AATTCCTCGC CCGATATCGG CTTCGACCGG TCGATCAATG CCTATCGCGG CTGCGAGCAT GGCTGCGTCT ACTGCTTCGC GCGGCCGACC CATGCCTATA TGGGCCTCTC CGCCGGGCTC GATTTCGAGA GCAAGCTCTT CGCCAAGCCG AACGCGGCGG ACCTTCTCCG CAAGGAACTC GCAAAGCCCG GCTACAAGGT CGCGCCCATC GCCATGGGCA CGAATACAGA TCCCTACCAG CCGATCGAGC AGCGATACCG CATCACGCGC AGCCTTCTCG AAGTGCTGTC CGAGTTCAAT CATCCGGTGA CGATCCTCAC GAAGTCGGCG CGCATCACGC GCGACCTCGA CATCCTCACC TCGCTCGCGA AGCGCAATCT CGTCCGCGTC GCCCTCTCGG TCACGACGCT CGACCCGAGG CTCGCCCGCG CGCTGGAGCC CCGCGCCTCC ACGCCCGCGC GCCGCATCGA GGCGATCCGC ATTCTCGCGC AAGCCGGCAT CCCCACCGGC GCCATGATCG CACCGATCAT CCCGGCCTTG AACGACGCCG AGATCGAAAA GCTCCTCACC GGCGTCGCCT ATGCCGGCGC TGAAAGCGCC AATTTCGTCA TCCTCCGCCT GCCGCTCGAA ATCCGCGACC TCTTCGTCGA ATGGCTGGAG GAACATGTGC CCGACCGCGC GTCCCGCGTC ATGTCCCTCA TCCGCCAGAT GCGCGGCGGC AAGGATTACG ACAGCACATG GGGCGAACGC CAGTCCGGCA CCGGCCCCTA TGCCTGGCAG ATCGCGCGGC GCTTCGAAAT CGCCACGAAG AAACTCAACC TCAACAAACG CCCCCTCGAA TCCCGAACCC TCGACTGCAC GCAGTTCATG GTCCCCGGCA GAGGCAAGCA ACTGGACCTG CTTTGA
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Protein sequence | MFSCCAILIS MTMSRDIAPP GRPVRANANS PVGARDVQRS RGLPDHSPSP RGAALVPPSV REPILPESGR RGRGALTNKS GRYEPQSRTV LDDGWDTIEE APPPLKTHVT EETARHIITR NSSPDIGFDR SINAYRGCEH GCVYCFARPT HAYMGLSAGL DFESKLFAKP NAADLLRKEL AKPGYKVAPI AMGTNTDPYQ PIEQRYRITR SLLEVLSEFN HPVTILTKSA RITRDLDILT SLAKRNLVRV ALSVTTLDPR LARALEPRAS TPARRIEAIR ILAQAGIPTG AMIAPIIPAL NDAEIEKLLT GVAYAGAESA NFVILRLPLE IRDLFVEWLE EHVPDRASRV MSLIRQMRGG KDYDSTWGER QSGTGPYAWQ IARRFEIATK KLNLNKRPLE SRTLDCTQFM VPGRGKQLDL L
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