| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0705 |
|---|
| Symbol | |
|---|
| ID | 5454700 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | + |
|---|
| Start bp | 767794 |
|---|
| End bp | 768264 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640876274 |
|---|
| Product | MarR family transcriptional regulator |
|---|
| Protein accession | YP_001411985 |
|---|
| Protein GI | 154251161 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1846] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.186956 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 70 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAAAT CCGACCCGGA GCCTGGCTTT CCGCCGCCGC TCACCGACCA TCTCTGCCTG
TGGATCTATG GGACGAACCT CGAAATCCAG CGCATTCACA AGGTTGTGCT GGATGAACTC
GGGATCACCT ATGCGCAGTA TCTCGTGCTC AACCTTCTCT GGGAGCGGGA TAAGCAGCCC
GTCGGCGAAC TCGCCGCCCA GCTCCGGCTG GAGACCAGCA CGATGACCCC GCTGCTGAAG
CGGCTCGAAG CCGGCGGCTA TGTTACCCGC GTCCGCAATC CGGAAGACGA GCGTCAGGTT
TTGATCGGCC TGCTGGACAA GGGCAGGGAT CTGCGAAAAG TAGCCGGCCG CGTGAGCGCC
AACCTGGCCG CGCGGATTGG TCTGTCCGAG GACGAACTAC GCCAGCTCAA TGAAACTATC
CGGAAGCTGC ACAATCAATT GATTGCCCCC GCCCCGGAGG AAAAGGGCTG A
|
|---|
| Protein sequence | MTKSDPEPGF PPPLTDHLCL WIYGTNLEIQ RIHKVVLDEL GITYAQYLVL NLLWERDKQP
VGELAAQLRL ETSTMTPLLK RLEAGGYVTR VRNPEDERQV LIGLLDKGRD LRKVAGRVSA
NLAARIGLSE DELRQLNETI RKLHNQLIAP APEEKG
|
|---|
| |