| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0693 |
|---|
| Symbol | |
|---|
| ID | 5456091 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | - |
|---|
| Start bp | 754518 |
|---|
| End bp | 755300 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640876262 |
|---|
| Product | dienelactone hydrolase |
|---|
| Protein accession | YP_001411973 |
|---|
| Protein GI | 154251149 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0412] Dienelactone hydrolase and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.560412 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 68 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTGAGA CGTACAGCAA GACAGAGTTC ACGGATGAGG GCGTAACGAA GCCCGTCTAT
GTGCGCGGCT CGGGGCCTGC AGTCATCGTC ATCCATGAGG TCCCCGGCAT CACGCCGGAG
GTGATCCGCT TCGCGGACTG GGTCGTGGCT GCGGGTTTCC GCGTCTACAT GCCCGAATTG
CTGGGCAAGG CCGGCAAGCC CATTACGCTG CCCTATGCGC TGGGCTCCAT CGCGAAGCTC
TGTATCAGCC GCGAATTCCA TGTTCTGGCC TCCCATCGCT CCAGTCCGGT GACGGGCTGG
TTGCGGGCGC TGGCCCGGCA CGCTCACGCA GAAGCCGGAG GCAAGGGAGT GGGCGCCATC
GGCATGTGCT TCTCGGGCAA TTTTGCGCTG TCGATGATGA TGGAGCCTGC GCTCATGGCA
CCCGTACTGT CGCAGCCTTC CATGCCCCTG CCGATCGGGT CGGCGAGAAA GGGGGCACTT
CACGTCTCGC CGGAAGAGCT TCAATGCGTG AAGGAGCGAT GCGCCAAGGG GGACAAGGTT
CTGGGCCTTC GCTTCAAGGG CGACCCGATG TGTCCGCCGG AGAAATTCGA GGCGCTCAGA
CGCGAACTCG GCGATGCTTT CGAAGGCATC GAGCTCGATG ACAAACATGC CAATCCGGCG
TCGCCGGCGC CCAAGCCCCA CAGCGTTCTG ACAGTCGACC TGATCGACCG CGACGGCGAG
CCGACGAAGG AAGCAGCAAG GCGCGTCATC GCCTTCTTTC AGGAAAGGCT ACTTGGGGCC
TAG
|
|---|
| Protein sequence | MLETYSKTEF TDEGVTKPVY VRGSGPAVIV IHEVPGITPE VIRFADWVVA AGFRVYMPEL
LGKAGKPITL PYALGSIAKL CISREFHVLA SHRSSPVTGW LRALARHAHA EAGGKGVGAI
GMCFSGNFAL SMMMEPALMA PVLSQPSMPL PIGSARKGAL HVSPEELQCV KERCAKGDKV
LGLRFKGDPM CPPEKFEALR RELGDAFEGI ELDDKHANPA SPAPKPHSVL TVDLIDRDGE
PTKEAARRVI AFFQERLLGA
|
|---|
| |