| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0689 |
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| Symbol | |
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| ID | 5456430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 750626 |
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| End bp | 751003 |
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| Gene Length | 378 bp |
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| Protein Length | 125 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640876258 |
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| Product | glycine cleavage system protein H |
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| Protein accession | YP_001411969 |
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| Protein GI | 154251145 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0509] Glycine cleavage system H protein (lipoate-binding) |
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| TIGRFAM ID | [TIGR00527] glycine cleavage system H protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 0.904294 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGACA TTCGCTTTAC GGATCAACAT GAATGGGTGC GTGTCGATGG CGACATCGCG
ACCATCGGCA TCACGGATTA TGCGCAGGAG CAGCTCGGTG ACGTCGTGTT CGTCGAACTG
CCGGAAGTCG GCAAGGACAT CGCAGCCGGG GACGAGGCGG CGGTTGTCGA ATCCGTCAAG
GCGGCCAGCG AGGTCTATTC GCCGGTGAGC GGCGAAGTCA TCGATGTCAA TAGCGACATC
GAGAAGACCC CGGCGGGCGT CAATGAAAAT GCGATGGGCG ACGGCTGGTT CATAAAGCTG
CGGCTCGCCG ACCCCTCCGA ACTCGACAAG CTGATGGACG AAGCCGCCTA CAGTGAATTT
GTCGAGAGCC TTCAGTAA
|
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| Protein sequence | MSDIRFTDQH EWVRVDGDIA TIGITDYAQE QLGDVVFVEL PEVGKDIAAG DEAAVVESVK
AASEVYSPVS GEVIDVNSDI EKTPAGVNEN AMGDGWFIKL RLADPSELDK LMDEAAYSEF
VESLQ
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