| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0677 |
|---|
| Symbol | |
|---|
| ID | 5453878 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | + |
|---|
| Start bp | 737109 |
|---|
| End bp | 738512 |
|---|
| Gene Length | 1404 bp |
|---|
| Protein Length | 467 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640876246 |
|---|
| Product | threonine synthase |
|---|
| Protein accession | YP_001411957 |
|---|
| Protein GI | 154251133 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0498] Threonine synthase |
|---|
| TIGRFAM ID | [TIGR00260] threonine synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.0874999 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 56 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAATACG TCAGCACAAG GGGCATCGCC CCGGAGCTTG AATTCGAGGA TGCTTTGCTC
GCGGGTCTCG CGCGCGATGG CGGCCTTTAT GTGCCCGTGG AGTGGCCGCA ACTCAGCGAA
CGCAAGATCA GGGCGCTGGC GGGACTGCCC TATGAAGAGG TCGCCTTCCG CGTCATGCGG
CCCTTTATCG GCGAGGCGAT CGGCGATGAC GACCTGCAGC GGATGATCGG CGAGGCCTAT
GCCTCGTTCC GCCACAAGGC GATTGTGCCA CTGCGGCAAC TCGGCTCGAA CGACTGGCTG
CTCGAGCTCT TTCACGGGCC GACGCTCGCC TTCAAGGACG TGGCGATGCA GATTCTCGCG
CGCCTGTTCG ACCATGTGCT GGCCGCGAAG GGCCGCCGCG TGACGGTAGT GGGCGCGACC
TCGGGCGATA CGGGCTCGGC CGCCATCGAA GCCTTCAAGG GCCGCGACAC GACCGACATT
TTCATCCTGC ACCCGAAGGG CCGCGTCTCC GAGGTGCAGC GCCGCCAGAT GACGACGGTG
CTGGATGCGA ACGTCCACAA CATCGCCATC GAAGGCTCGT TCGACGATTG CCAGGCGCTG
GTGAAGGCCA TGTTCAACGA TCATGGCTTC CGCGACGAAG TGAGCCTTGC TGGCGTCAAT
TCGATCAACT GGGGCCGGGT AATGGCCCAG ATCGTCTATT TTTTCACCGC TGCCGTGGCG
CTTGGCGGCC CTGCGCGGCC GGTCGCCTTC TCGGTGCCGA CGGGGAATTT CGGCGATATT
TTCGCCGGCT ATGCGGCGGC GCGGATGGGA CTTCCGATCG AGAAGCTGAT CGTCGCGACC
AATGTGAACG ACATCCTCGC GCGGACGATG GAGAGCGGCC GCTATGAGGT CGACAAGGTC
GTGCCGACGA TCAGCCCGAG CATGGACATC CAGGTCTCGT CCAATTTCGA GCGGCTGCTT
TTCGACGCCT ATGGGCGCGA TGGCGCGACC GTGACGCGGC TGATGCAAAG CCTGTCGCAA
TCGGGCGCTT TCACCATCGA CGCGCTGCGC CTCGAAGCGA TCCGCGCCCA ATTCGGCGCC
GCCCGTGTCG ATGAAAGCGA GACCTCGGCG ACCATCAAGG AGACGCTGGC GGCGACAGGC
GAGCTGCTCG ACCCGCATTC GGCTGTGGGT CTTGCCGCTG CGGCAAGGTT GCGGGGCGAT
CCCTCGGTGC CGATGATTAC GCTGGCGACG GCGCATCCCG CGAAGTTTCC CGATGCGGTG
AAGGCGGCGA CCGGCATCCA CCCGGATCTG CCGCCTGCCA TGGCCGATAT TTTCACCCGT
GAGGAACGCC TCGCGGCGCT GCCGAACGAT CTCGGCGCGG TCGAAACCTT TATCCGCGAA
CGCGCGCGCT CCGTCGCCGC GTGA
|
|---|
| Protein sequence | MKYVSTRGIA PELEFEDALL AGLARDGGLY VPVEWPQLSE RKIRALAGLP YEEVAFRVMR
PFIGEAIGDD DLQRMIGEAY ASFRHKAIVP LRQLGSNDWL LELFHGPTLA FKDVAMQILA
RLFDHVLAAK GRRVTVVGAT SGDTGSAAIE AFKGRDTTDI FILHPKGRVS EVQRRQMTTV
LDANVHNIAI EGSFDDCQAL VKAMFNDHGF RDEVSLAGVN SINWGRVMAQ IVYFFTAAVA
LGGPARPVAF SVPTGNFGDI FAGYAAARMG LPIEKLIVAT NVNDILARTM ESGRYEVDKV
VPTISPSMDI QVSSNFERLL FDAYGRDGAT VTRLMQSLSQ SGAFTIDALR LEAIRAQFGA
ARVDESETSA TIKETLAATG ELLDPHSAVG LAAAARLRGD PSVPMITLAT AHPAKFPDAV
KAATGIHPDL PPAMADIFTR EERLAALPND LGAVETFIRE RARSVAA
|
|---|
| |