Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_0673 |
Symbol | |
ID | 5455151 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 733462 |
End bp | 734301 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640876242 |
Product | cytochrome c oxidase subunit III |
Protein accession | YP_001411953 |
Protein GI | 154251129 |
COG category | [C] Energy production and conversion |
COG ID | [COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 0.562387 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTGACG CCCACGCCAA ACATCACGAC TATCATCTGG TAGACCCGAG CCCATGGCCG GTCGTCGGAT CGATCGGCGC CTTCGTGCTC GCCATCGGCG CCGTCAACTG GATGCACGGC TCTTCCTCAT GGGTCATGCT GATCGGCTTC GCGATCGTGT TCTACACGAT GTTCGCCTGG TGGCGCGATG TGATCCGGGA AGCGCGCAGG GGCGACCACA CGCCCGTCGT GCAGCTTCAC CTGCGCTACG GCATGATCCT GTTCATCGCC TCCGAGGTGA TGTTCTTCGT GGCCTGGTTC TGGGCCTTCT TCGATGCGAG CCTTTTCCCC GGCGACACCG TGCAGGCGGC GCGCGCGGAA TTCACCGGCG GCCACTGGCC GCCCCAGGGC GTCGAAGTTT TCGATCCGTG GCACCTGCCG CTCATCAACA CGCTGATCCT GCTGACGTCG GGCACGACCG TCACCTGGGC GCATCACGCG CTGCTGCATG ACGACCGCAA GGGCCTGGTG CAGGGCCTCG CGCTGACGGT GGCGCTCGGC CTCATCTTCA CCGCCGTGCA GGCCTACGAA TATGCCCATG CGGCATTTTC GTTCGGCGGC AGCATCTATG GCGCGACTTT CTTCATGGCG ACCGGCTTCC ACGGCTTCCA TGTGATCGTC GGCACGATCT TCCTGATCGT CTGCCTGCTG CGCGCGATGA AGGGCGACTT CACCCCGAAG CAGCATTTCG GCTTCGAGGC GGCGGCCTGG TACTGGCATT TCGTCGACGT GGTCTGGATC TTCCTGTTCT TCTCCATCTA CATCTGGGGA TCCGCAGGCG CCACGATCGC GGTGCACTGA
|
Protein sequence | MADAHAKHHD YHLVDPSPWP VVGSIGAFVL AIGAVNWMHG SSSWVMLIGF AIVFYTMFAW WRDVIREARR GDHTPVVQLH LRYGMILFIA SEVMFFVAWF WAFFDASLFP GDTVQAARAE FTGGHWPPQG VEVFDPWHLP LINTLILLTS GTTVTWAHHA LLHDDRKGLV QGLALTVALG LIFTAVQAYE YAHAAFSFGG SIYGATFFMA TGFHGFHVIV GTIFLIVCLL RAMKGDFTPK QHFGFEAAAW YWHFVDVVWI FLFFSIYIWG SAGATIAVH
|
| |