Gene Plav_0673 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0673 
Symbol 
ID5455151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp733462 
End bp734301 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content64% 
IMG OID640876242 
Productcytochrome c oxidase subunit III 
Protein accessionYP_001411953 
Protein GI154251129 
COG category[C] Energy production and conversion 
COG ID[COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value0.562387 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGACG CCCACGCCAA ACATCACGAC TATCATCTGG TAGACCCGAG CCCATGGCCG 
GTCGTCGGAT CGATCGGCGC CTTCGTGCTC GCCATCGGCG CCGTCAACTG GATGCACGGC
TCTTCCTCAT GGGTCATGCT GATCGGCTTC GCGATCGTGT TCTACACGAT GTTCGCCTGG
TGGCGCGATG TGATCCGGGA AGCGCGCAGG GGCGACCACA CGCCCGTCGT GCAGCTTCAC
CTGCGCTACG GCATGATCCT GTTCATCGCC TCCGAGGTGA TGTTCTTCGT GGCCTGGTTC
TGGGCCTTCT TCGATGCGAG CCTTTTCCCC GGCGACACCG TGCAGGCGGC GCGCGCGGAA
TTCACCGGCG GCCACTGGCC GCCCCAGGGC GTCGAAGTTT TCGATCCGTG GCACCTGCCG
CTCATCAACA CGCTGATCCT GCTGACGTCG GGCACGACCG TCACCTGGGC GCATCACGCG
CTGCTGCATG ACGACCGCAA GGGCCTGGTG CAGGGCCTCG CGCTGACGGT GGCGCTCGGC
CTCATCTTCA CCGCCGTGCA GGCCTACGAA TATGCCCATG CGGCATTTTC GTTCGGCGGC
AGCATCTATG GCGCGACTTT CTTCATGGCG ACCGGCTTCC ACGGCTTCCA TGTGATCGTC
GGCACGATCT TCCTGATCGT CTGCCTGCTG CGCGCGATGA AGGGCGACTT CACCCCGAAG
CAGCATTTCG GCTTCGAGGC GGCGGCCTGG TACTGGCATT TCGTCGACGT GGTCTGGATC
TTCCTGTTCT TCTCCATCTA CATCTGGGGA TCCGCAGGCG CCACGATCGC GGTGCACTGA
 
Protein sequence
MADAHAKHHD YHLVDPSPWP VVGSIGAFVL AIGAVNWMHG SSSWVMLIGF AIVFYTMFAW 
WRDVIREARR GDHTPVVQLH LRYGMILFIA SEVMFFVAWF WAFFDASLFP GDTVQAARAE
FTGGHWPPQG VEVFDPWHLP LINTLILLTS GTTVTWAHHA LLHDDRKGLV QGLALTVALG
LIFTAVQAYE YAHAAFSFGG SIYGATFFMA TGFHGFHVIV GTIFLIVCLL RAMKGDFTPK
QHFGFEAAAW YWHFVDVVWI FLFFSIYIWG SAGATIAVH