| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0670 |
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| Symbol | |
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| ID | 5456777 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 730509 |
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| End bp | 732116 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640876239 |
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| Product | cytochrome c oxidase subunit I type |
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| Protein accession | YP_001411950 |
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| Protein GI | 154251126 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.154602 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 0.969161 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGGGC AAGCTGCGGG CGCGCACGCC GATCACGCCG ACCACCCCAC GGGCTGGAAG
CGGTACGTCT ATTCGACGAA CCACAAGGAC ATCGGCACGA TGTACCTGAT CTTCGCGATC
ATCGCGGGGA TCCTCGGTGG CGGTCTTTCC GTGCTGATGC GCGCGGAGCT GATGTATCCC
GGCGACGGCG TCCTTGGCGG CGACCACAAC CTCTTCAACG TGCTGGTAAC GGCGCACGGC
CTCATCATGA TCTTCTTCAT GGTGATGCCT GCGATGATCG GCGGTTTCGG CAACTGGTTC
GTGCCGCTGA TGATCGGCGC GCCGGACATG GCCTTCCCGC GGATGAACAA TATTTCGTTC
TGGCTGCTTC CGCCGGCGCT CGGCCTTCTC GTGATCTCGA TGTTCGTACC CGGCATGCCG
GGCGGTAATG GCGCGGCCGG CGGCTGGACG ATCTATCCGC CGCTCTCGAC CTCCGGCACG
CCTGGACCGG CGATGGACTT CGCGATCCTC GCGCTCCACA TCGCGGGCGC CTCGTCGATC
CTCGGCGCGA TCAACTTCAT CACCACCATC TTCAACATGC GCGCACCGGG CATGACGCTG
CACAAGATGC CGCTCTTCGT CTGGTCGATC CTCGTCACCG TGTTCCTGCT GCTGCTTTCG
CTGCCGGTTC TCGCGGGCGC GATCACCATG CTGCTGACGG ACCGCAACTT CGGCACGACC
TTCTTCTCGC CCGAAGGCGG CGGCGACCCG ATCCTGTTCC AGCATCTGTT CTGGTTCTTC
GGGCACCCGG AAGTGTACAT CCTGATCCTG CCCGGCTTCG GCATGATCTC GCAGATCATC
TCGACCTTCG CGCGCAAGCC CGTGTTCGGT TATCTCGGCA TGGCCTATGC GATGGTCGCG
ATCGGCGTCG TCGGCTTCGT CGTGTGGGCG CACCACATGT ACACGGTCGG CATGTCGGTC
AACACGCAGG CCTATTTCGT GGCCGCGACG ATGGTCATCG CGGTGCCGAC GGGCATCAAG
ATCTTCTCCT GGATCGCGAC GATGTGGGGC GGCTCGATCG AGTTCCGCAC GCCGATGCTA
TGGGCGATTG GCTTCATTTT CCTCTTCACC ATCGGCGGCG TGACCGGCGT GGTGCTGGCG
AATGCCGCGG TCGACCGCAC GCTGCACGAC ACTTATTACG TGGTGGCGCA TTTCCACTAC
GTGCTGTCGC TCGGCGCCGT CTTCGCGATC TTCGCGGGCT GGTACTACTG GTTCCCGAAG
ATGTTCGGCT ACATGTACAA CGAGTTCATC GGCAAGCTGC ACTTCTGGAT CACCTTCATC
GGCGTGAACC TGGTGTTCTT CCCGCAGCAT TTCCTCGGAC TGCAGGGCAT GCCGCGCCGT
TACTCGGACT ATCCGGATGC CTTCGCCTAC TGGAACCTGG TGTCGTCCAT CGGCTCCTAC
ATCTCCGCCT TCGGCGTACT GGTCTTCCTC TTCGGCATCG CGCAGGCCTT CATGAGGAAG
GTGCCTGCGG GTAACAGCCC CTGGGGCGAA GGCGCGACCA CCCTCGAGTG GACGCTCTCC
TCGCCGCCGC CGTTCCACCA GTTCTCGGAA CTGCCGCGGA TCAAGTGA
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| Protein sequence | MAGQAAGAHA DHADHPTGWK RYVYSTNHKD IGTMYLIFAI IAGILGGGLS VLMRAELMYP
GDGVLGGDHN LFNVLVTAHG LIMIFFMVMP AMIGGFGNWF VPLMIGAPDM AFPRMNNISF
WLLPPALGLL VISMFVPGMP GGNGAAGGWT IYPPLSTSGT PGPAMDFAIL ALHIAGASSI
LGAINFITTI FNMRAPGMTL HKMPLFVWSI LVTVFLLLLS LPVLAGAITM LLTDRNFGTT
FFSPEGGGDP ILFQHLFWFF GHPEVYILIL PGFGMISQII STFARKPVFG YLGMAYAMVA
IGVVGFVVWA HHMYTVGMSV NTQAYFVAAT MVIAVPTGIK IFSWIATMWG GSIEFRTPML
WAIGFIFLFT IGGVTGVVLA NAAVDRTLHD TYYVVAHFHY VLSLGAVFAI FAGWYYWFPK
MFGYMYNEFI GKLHFWITFI GVNLVFFPQH FLGLQGMPRR YSDYPDAFAY WNLVSSIGSY
ISAFGVLVFL FGIAQAFMRK VPAGNSPWGE GATTLEWTLS SPPPFHQFSE LPRIK
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