| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0666 |
|---|
| Symbol | |
|---|
| ID | 5456410 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | - |
|---|
| Start bp | 727245 |
|---|
| End bp | 728678 |
|---|
| Gene Length | 1434 bp |
|---|
| Protein Length | 477 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640876235 |
|---|
| Product | peptidase U62 modulator of DNA gyrase |
|---|
| Protein accession | YP_001411946 |
|---|
| Protein GI | 154251122 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.231569 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 57 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTCTT CTTCCGACGA TCTCTTCTTC ACCCGCACCG GGCTCGACCG CGACCGCGTC
TCGGCGCTTG TCGGCGAGAC GCTCTCCGGC GCTGATGATG GCGAGCTCTT CATGGAGTAC
CGCCAGTCGG AAGTGCTCGG CTTCGACGAT GGCCGCCTGA AAACCGCGAG CTTCGACACC
AATCAGGGCT TCGGGCTTCG CTGCGTCGCG GGCGAGGCGA CGGGATATGC CCATGCCTCC
GAACTCTCCG AAGCCGCGTT GAAGCGCGCG AGCGATGCCG TGCAGGCGGT GAAGACGGGT
CACACCGGCG TCTCCGCCGA AGGCCCCGCC CGCACCAATA CGCATCTTTA TTCGGATGAA
AATCCTCTCG GCGCGCAGAG CTTCGAGGAG AAGGTGAAGC TGCTGGCCGA GATTGACGCC
TATGCCCGGG CGAAGGATCC CCGCATCCAG CAGGTCTCGG CCTCGCTTGC GGGCGAGTGG
CAGGCGGTCG AGATCGTCCG CGCCGACGGC TCGTCGCTGC GCGACATCCG CCCCCTTGTC
CGTCTCAACG TCGCCATCGT CGCCGGCGAG AATGGCCGCC AGGAGACGGG CTCCTACGGC
GTCGGCGGCC GCATGGGCTA TGACGTCTTC ATCGACCCGC TGAAATGGCA GGCGCAGGTG
GACGAGGCGC TACGTCAGGC GCTGGTCAAT CTCGAAGCCG TCCCCGCCCC CGCCGGCGAA
ATGGATGTGG TGCTCGGGCC GGGCTGGCCG GGCATCCTGC TTCACGAAGC CATCGGCCAC
GGCCTCGAGG GCGATTTCAA CCGCAAGAAG ACCTCCGCCT TTGCGGGGCT CCTCGGCCAG
CGCGTCGCCG CGCCCGGCAT CACGGTCGTC GATGACGGCA CGCTCGCGGA TCGCCGCGGC
TCGCTCACCA TCGACGACGA GGGCACGCCG ACCTCGCGCA CCGTCCTCAT CGAAGACGGC
ATCCTGAAGG GCTACATGCA GGACCGCCTC AACGCCCGCC TCATGGGCAT GGCGGCGACG
GGCAATGGCC GCCGCGAATC CTACGCGCAT CAGCCGATGC CGCGCATGAC CAACACCTAT
ATGCTGTCCG GCCATCACGA TCCGAGCGAG ATTCTCGCCT CCGTGAAGAA GGGCCTTTAC
GCCGTCTCCT TCGGCGGCGG CCAGGTCGAC ATCACATCCG GCAAGTTCGT CTTTACCTGC
ACCGAAGCCT ACATGATCGA GGACGGCAAG ATCGGCGCGC CGGTCAAGGG CGCGACGCTG
ATCGGCAACG GACCGGACGT CCTCACCCGC GTCTCCATGA TCGGCAACGA CATGAAGCTC
GATCCCGGCA TCGGCACTTG CGGCAAGGCA GGACAAGGCG TCCCCGTCGG CGTCGGCCAG
CCGACGCTCC GCATCGACGG GCTGACGGTC GGCGGTACGG CGCGGGCGGC ATAA
|
|---|
| Protein sequence | MTSSSDDLFF TRTGLDRDRV SALVGETLSG ADDGELFMEY RQSEVLGFDD GRLKTASFDT
NQGFGLRCVA GEATGYAHAS ELSEAALKRA SDAVQAVKTG HTGVSAEGPA RTNTHLYSDE
NPLGAQSFEE KVKLLAEIDA YARAKDPRIQ QVSASLAGEW QAVEIVRADG SSLRDIRPLV
RLNVAIVAGE NGRQETGSYG VGGRMGYDVF IDPLKWQAQV DEALRQALVN LEAVPAPAGE
MDVVLGPGWP GILLHEAIGH GLEGDFNRKK TSAFAGLLGQ RVAAPGITVV DDGTLADRRG
SLTIDDEGTP TSRTVLIEDG ILKGYMQDRL NARLMGMAAT GNGRRESYAH QPMPRMTNTY
MLSGHHDPSE ILASVKKGLY AVSFGGGQVD ITSGKFVFTC TEAYMIEDGK IGAPVKGATL
IGNGPDVLTR VSMIGNDMKL DPGIGTCGKA GQGVPVGVGQ PTLRIDGLTV GGTARAA
|
|---|
| |