| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0653 |
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| Symbol | |
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| ID | 5455747 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 717581 |
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| End bp | 718603 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640876222 |
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| Product | 4-hydroxybenzoate polyprenyl transferase |
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| Protein accession | YP_001411933 |
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| Protein GI | 154251109 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases |
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| TIGRFAM ID | [TIGR01474] 4-hydroxybenzoate polyprenyl transferase, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.110294 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 0.440734 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCTCTC CCGGGGTGCA AACAAGGCTC CGAATCGCTA GTGTCGGCCC GTCGAAACAG
CCCCGGAAAA TGCTCCCTGG GCGCCTCCTC GCAGCGGATC CGAAGATGAC CCAGCAGGCC
GAAACCCGCG TCGCCGATGC GCCGCCCGCG AACTGGGTGG ACCGCTTCGC GCCTCGTTTC
GCGCGTCCCT ATATGCGGCT CGCGCGCCTC GACAGGCCCA TCGGCACATG GCTGCTGCTG
CTCCCTTGCT GGTGGTCTAT CGCGCTTGCA GGCGATGCGG GCCCGGACCT CGGCCTCATG
CTTATCTTCG CTATCGGCGC AATCGTCATG CGCGGCGCGG GCTGCACATG GAACGACATC
GCGGATCGCA ACATCGACGC GGCGGTGGAG CGCACGCGGT CGCGTCCCAT TCCATCGGGC
GCCGTCAGCG TCAAGGCCGC GTGGATTTTT CTTGCCGCGC AATGTCTCGC CGGTCTCGCG
GTTCTTCTTT CGCTCAATGC GTTCACCATC GCGCTTGGCC TCGCATCGCT CGCGCTCGTC
GCGATCTATC CTTTCATGAA GCGCGTCACG TATTGGCCGC AGATCGTTCT CGGCCTCGCC
TTCAATTGGG GCGCGCTGAT GGGCTGGGCG GCCGTCACGG GTTCGCTCGC GCTCGCGCCG
GCGCTGCTTT ATCTCGGCGC GATCTTCTGG ACCGTCGGCT ATGACACGAT CTATGCGCAT
CAGGACAAGG ACGACGATGC GCTGATCGGC GTCAAGTCAT CGGCGCTGAA GCTCGGGGCA
TCCACGCGGA AATGGCTCTG GGTTTTCTAT GGTGCGATGA TCGCGGCGCT TGTCGCGTCG
GGCGCCGCCG CCTCCATCGG CATGTTCTTC TATCTCGGCG TCGCGCTCGC CGCCCTGCAG
CTCGTCTGGC AGATCGTGAA GCTCGATGTC GACGATCCGG CGCTCTGCCT TCACCTCTTC
CGCTCCAATC GCGATTTCGG CTTCATCGTC TTCGCCGCCA TCGTCGCGGG AAAACTCTTC
TAG
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| Protein sequence | MPSPGVQTRL RIASVGPSKQ PRKMLPGRLL AADPKMTQQA ETRVADAPPA NWVDRFAPRF
ARPYMRLARL DRPIGTWLLL LPCWWSIALA GDAGPDLGLM LIFAIGAIVM RGAGCTWNDI
ADRNIDAAVE RTRSRPIPSG AVSVKAAWIF LAAQCLAGLA VLLSLNAFTI ALGLASLALV
AIYPFMKRVT YWPQIVLGLA FNWGALMGWA AVTGSLALAP ALLYLGAIFW TVGYDTIYAH
QDKDDDALIG VKSSALKLGA STRKWLWVFY GAMIAALVAS GAAASIGMFF YLGVALAALQ
LVWQIVKLDV DDPALCLHLF RSNRDFGFIV FAAIVAGKLF
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