| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0633 |
|---|
| Symbol | |
|---|
| ID | 5455599 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | + |
|---|
| Start bp | 698656 |
|---|
| End bp | 699174 |
|---|
| Gene Length | 519 bp |
|---|
| Protein Length | 172 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640876202 |
|---|
| Product | appr-1-p processing domain-containing protein |
|---|
| Protein accession | YP_001411913 |
|---|
| Protein GI | 154251089 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2110] Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 63 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACCCG AAGGAACCGC CATCGAGATA AGGGTAGGCG ACATCACGAA GCTCACGTCA
GACGCCATCG TGAATGCCGC AAATGAGCGG CTGGCGCCGG GCGGCGGCGT CTGCGGGGCG
ATTTTCCGTG CCGCCGGAGC GGGACTGGCG GAGGAATGCC GGGCGCTCGG CGGCTGTCCG
GCGGGCGAGG CCCGGATAAC GGGCGGTTAC GGCCTTCCCG CCCGATGGAT CATTCATGCG
GTGGGGCCGG TCTGGCGGGG CGGCGGCGAG GGCGAGGCGG CGCTGCTCGC CGGCTGTTAC
CGGAACGCAT TGGCGCTGGC CGCGGAAAAG AAGCTGGAGA CGATTGTCTT CCCGGCGATA
TCGACCGGCA TTTTCGGCTA TCCGGCGGAC GAGGCCGCAA AGGTTGCGGT AGCAGCCTGC
CGCGATCATG CGGGAAGACA TGAGTTTCCG AAGCGGATCA TCCTCGTCGC CTTCGACGAG
GCGCAGGCAA AGCCGCTGAG GGCGGCGCTG GTGGGCTGA
|
|---|
| Protein sequence | MTPEGTAIEI RVGDITKLTS DAIVNAANER LAPGGGVCGA IFRAAGAGLA EECRALGGCP
AGEARITGGY GLPARWIIHA VGPVWRGGGE GEAALLAGCY RNALALAAEK KLETIVFPAI
STGIFGYPAD EAAKVAVAAC RDHAGRHEFP KRIILVAFDE AQAKPLRAAL VG
|
|---|
| |