| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0628 |
|---|
| Symbol | |
|---|
| ID | 5456370 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | - |
|---|
| Start bp | 695132 |
|---|
| End bp | 695650 |
|---|
| Gene Length | 519 bp |
|---|
| Protein Length | 172 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640876197 |
|---|
| Product | TspO and MBR like protein |
|---|
| Protein accession | YP_001411908 |
|---|
| Protein GI | 154251084 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3476] Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 59 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACTG ACCGGACACA GGCGCCCGCC ACAGGACCGA GCCCGCTCGT CTCCCTTGCC
TATCTCTTCG TCTTTCTGGC CGTCGTCTTT CTCGCCGCCG CGGCAGGTGG CGCGATCACG
TCCACGAGCG TCGGCACCTG GTATCAGGAC CTGGCAAAGC CGGCGCTCAC GCCCGCGCGC
TGGGTTTTCC CCGTGGCCTG GAATTTCCTC TACTTCCTGA TGGCGATTTC GGCCTGGCTG
GTCTGGCGGG CGGCGGGCAG CTTCGACAGG GCGGGCTTCG CGCTGTCGCT GTTCGGCATC
CAGCTGTCGC TGAACCTCAG CTGGAGCATC GTCTTTTTCG GTCTGATGAG CCCCTCGCTC
GGCATCGCCG CCATTATCGC GCTCGATCTC GCGATCATCG GCACCATGCT TGCCTTTTTC
GGCATCAGCC GGCTGGCGGC GCTGTTGCTG GTGCCCTATC TCGGATGGAC GTTGTTCGCG
ACTTACCTGA CCATCGCCAT TGCCGTATTG AACGCTTGA
|
|---|
| Protein sequence | MTTDRTQAPA TGPSPLVSLA YLFVFLAVVF LAAAAGGAIT STSVGTWYQD LAKPALTPAR
WVFPVAWNFL YFLMAISAWL VWRAAGSFDR AGFALSLFGI QLSLNLSWSI VFFGLMSPSL
GIAAIIALDL AIIGTMLAFF GISRLAALLL VPYLGWTLFA TYLTIAIAVL NA
|
|---|
| |