| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0627 |
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| Symbol | |
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| ID | 5455692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 693114 |
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| End bp | 694997 |
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| Gene Length | 1884 bp |
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| Protein Length | 627 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640876196 |
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| Product | ABC transporter related |
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| Protein accession | YP_001411907 |
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| Protein GI | 154251083 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAGCC AGAAGACCGA CGCCAGACCC GGCCCCGACA GCCCCGGCAA TCGTCCCGAT
TCCGTGCCCA ATCCCCTGTC CGTACGGCCG CCGGAGCTGA CGACGCGCGA CGTCCTCAGC
CGCATGGCGC GCGAATACCT GAAGCCCCAT TGGCGGCTCG CGGTTACGGC GCTCCTTGCC
AGCGTGGTGG TGGCGGGCGC AACCGGCGTC CTGCCGCTTC TCATCAAGCA TGCGCTGGAC
AATATCGTCG GTTCGGATTC CTGGATGCTG ATGCTTGTCG CGGCGGGCGC CATCGGCGCC
ACGGCGGTAC AGGCCATCGC GACCTACATC TCCAAAGTGA ACATGAACAC GATCGGCCAG
CACATCGTGG CGACGATCCA GCAAAGCATG TTCGCCCGCA TCGTCCATGC CGACCTCGCC
TGGGTCAGCG GCACGCATTC CGGCCGGTTC CTGTCGAGCT TCCTTTACGA CGCCACCCGC
GTCCGCGACT CCATCACCAC CTCCATCATC GATCTCGGCC AGAATTTCCT CACCGTCCTC
GCGCTGATCG GCGCCATGTT CTATCTGAAC TGGCAGCTCG CGCTCATGGG CACCACCGTC
ATTCCGGTGA TCGCCGTTCT GGTGCGTCAG CTCGGCCGGC GGACGCGCAA GGCCGCCAAG
CAGGGCATGG AAGGCTCGGG CAATCTCACC GCCGTCATCT CCGAGGCCCT GAGCGGCATC
CGTGTCGTCA AGGCCTACGA CCAGGAAGAA ACCGAGATCG CGCGCACCAC GCGCCGGATC
ATGGAAGTCC GCCACCATGC GCTGCGCGCC ATGAAAAGCC GCGCCATGGC GAGCCCCGTC
ACCGGCACGC TGTCCGGCAT CGGCATCGCC GCCGTCATCT ATTTCGGCGG TCGCAGCGTG
CAGACCGGCC TCCTCACCAT CGGCGATCTC GGCGGCTTTC TCTCCGCCAT GATGCTCGCC
TATGAGCCGC TGAAGAAGCT CGCCAACACG CAAACGCTGA TGCAGGAAGG CGTCGCCGCC
GCCATCCGCA TCTTCCCCAT TCTCGACATC CGTCCCACCA TCGCGAGCCC CGAAGGCGCG
AAGAAGCTCG AAGTGGCGAA CAGCGCGATC CGTTTCGACA ACGTGCATTT CCACTATGGA
GACGGCACGC CCGCCCTTAA CGGCATCGAC ATCGAAGTGC CGATGGGACA TACGGTTGCC
CTTGTCGGCC CGTCCGGCTC CGGCAAGAGC ACCATCCTGA ATCTCGTGCC CCGCTTCTAC
GATCCGACAA CCGGCCGCGT CACCATCGGC GGCCAGGATG TGCGCGAGGT CACGCTCGGC
TCGCTCCGCG CCGCAAGCTC GCTCGTCACG CAAGAGCCCT TCCTCTTCGA CGACACCATC
AAGGCGAACA TCGCCTATGG CTCGCCCGAT GCGACGGACG CCGAAATCGA GGAAGCGGCG
CGCAATGCCG CCGCGCATGA ATTCATCGCG GGCCTGCCCC GTGGATACGA AACCACCGTC
GGCGAGGCGG GCTTCAAATT GTCCGGCGGC CAGCGCCAGC GCATCGCCAT CGCGCGCGCC
ATGCTGAAAA ACGCCTCCAT CCTGCTGCTC GACGAGGCCA CTTCCGCGCT CGATACGGCA
TCCGAAATGC AGGTCCAGAG CGCGCTTGCG CGCCTGATGC AGGGGCGGAC GACGCTTGTC
ATCGCGCACC GCCTCTCGAC CATCAAGCAC GCACACAACA TCTACGTCAT CGACGACGGG
CGCGTTGTCG AACAAGGCAG CCACGAGGAG CTTGTCGCGC AGGGCGGCCT CTATGCGGAG
CTTTCCCGCT CGCAATTCAT CGAGGAGCCG GTAGCCGGCC GCGCGGCGTC CGACGAGCTG
CCCCAGGCTG TCGCGGGAGA ATAA
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| Protein sequence | MPSQKTDARP GPDSPGNRPD SVPNPLSVRP PELTTRDVLS RMAREYLKPH WRLAVTALLA
SVVVAGATGV LPLLIKHALD NIVGSDSWML MLVAAGAIGA TAVQAIATYI SKVNMNTIGQ
HIVATIQQSM FARIVHADLA WVSGTHSGRF LSSFLYDATR VRDSITTSII DLGQNFLTVL
ALIGAMFYLN WQLALMGTTV IPVIAVLVRQ LGRRTRKAAK QGMEGSGNLT AVISEALSGI
RVVKAYDQEE TEIARTTRRI MEVRHHALRA MKSRAMASPV TGTLSGIGIA AVIYFGGRSV
QTGLLTIGDL GGFLSAMMLA YEPLKKLANT QTLMQEGVAA AIRIFPILDI RPTIASPEGA
KKLEVANSAI RFDNVHFHYG DGTPALNGID IEVPMGHTVA LVGPSGSGKS TILNLVPRFY
DPTTGRVTIG GQDVREVTLG SLRAASSLVT QEPFLFDDTI KANIAYGSPD ATDAEIEEAA
RNAAAHEFIA GLPRGYETTV GEAGFKLSGG QRQRIAIARA MLKNASILLL DEATSALDTA
SEMQVQSALA RLMQGRTTLV IAHRLSTIKH AHNIYVIDDG RVVEQGSHEE LVAQGGLYAE
LSRSQFIEEP VAGRAASDEL PQAVAGE
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