| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0626 |
|---|
| Symbol | |
|---|
| ID | 5453587 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | - |
|---|
| Start bp | 692355 |
|---|
| End bp | 693107 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640876195 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001411906 |
|---|
| Protein GI | 154251082 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2121] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 59 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGCTC GCAAGAAAAA AAGAATAACG AAAAGCGAAA CCTTCCAGAC CTTCGTCGCC
TGGCTGATCG CGCAGTTCAT CCGCATCGTG CGCCGCACCG GCCGCTTCGA GGTTCGCCGC
GGCGACATCG CGGCCCGCTT CTGGGCCGAG GACAAGCCCT TCATCGCCAC GAGCTGGCAT
GGCCAGAACA TGCTGACGCC CTGCTTCTGG CATAACTGGC GCGAGGTGCG CGTTCTCGTC
TCCAAGCATG GCGATGGAGA AATCGTCGCC AACATCATGC GCATTCTCGG CGTCGGCACC
ATTCGCGGCG CCGGCGTGCC GAAGGGCGAG GAACGGGCCC ACAAGCAGAA GGGCAAGGGC
GGCGCGGGCG CGCTGCGCGC CATGGTGCGT GCGCTGGGCG AAAATATCTC CGTGGCGCTC
ACGGCCGATC TGCCGCCCGG CCCCGCGCGG CGCGCGGGCG ACGGCATCGT CATGCTGGCG
CGTCTTTCCG GGCGGCCCAT CGTGCCGATC GCGGCGACGA CAAGCGCCCG CATCCGGCTC
AACAACTGGG ACAGCTTCAC CATCAACCTT CCCTTCTCCC GGGGAGCGGT CGTCTGGGGC
GAACCGATCT ATGTGGCGCG CGATGCCGGC CCCGAGGAGA TAGAGGCGGC GCGTCTTCTG
GTTCAGCAGG GCCTCAACGC CGTTGCGGCG GAAGCCGAGC GCATGGTCGG CCGCGCCCCT
TTGCCGAGCG ACGAGGGAGC GGTAGCGCAT TGA
|
|---|
| Protein sequence | MPARKKKRIT KSETFQTFVA WLIAQFIRIV RRTGRFEVRR GDIAARFWAE DKPFIATSWH
GQNMLTPCFW HNWREVRVLV SKHGDGEIVA NIMRILGVGT IRGAGVPKGE ERAHKQKGKG
GAGALRAMVR ALGENISVAL TADLPPGPAR RAGDGIVMLA RLSGRPIVPI AATTSARIRL
NNWDSFTINL PFSRGAVVWG EPIYVARDAG PEEIEAARLL VQQGLNAVAA EAERMVGRAP
LPSDEGAVAH
|
|---|
| |