| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0620 |
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| Symbol | |
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| ID | 5456560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 686459 |
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| End bp | 687892 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640876189 |
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| Product | exodeoxyribonuclease VII, large subunit |
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| Protein accession | YP_001411900 |
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| Protein GI | 154251076 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1570] Exonuclease VII, large subunit |
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| TIGRFAM ID | [TIGR00237] exodeoxyribonuclease VII, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.419722 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCCTT CGGACACACA AAGCCCCGCC GCCAACAACG CCCATGAATT CTCGGTCAGC
GAGATTTCCT TCGCGCTGAA GAAGACGGTG GAGGAGACCT TCGGCCATGT CCGCGTGCGC
GGCGAGATTA CGGGATATCG GGGGCCGCAT TCCTCCGGCC ATTGCTATTT CGGCCTGAAG
GACGACAAGG CACGGATGGA CGCCGTGATC TGGAAGGGGA ATTTCGGCAA GCTCCGCTTC
AAGCCCGAAG AGGGCATGGA GGTGATCGCG ACGGGGAAGC TGACGACCTA TCCGGGTAGC
TCCAAATACC AGATCGTGAT CGACCATCTG GAGCCCGCCG GCGTCGGCGC GCTGATGGCC
CTGCTGGAGG AACGGCGGAA GAAGCTCGCC GCCGAAGGAT TGTTTGCCGC CGAGCGAAAG
CGCGCGCTGC CGTTTCTCCC CGAGGTGATC GGCGTGGTGA CGAGCCCGAC CGGCGCCGTC
ATCCGCGACA TTCTCCACCG CCTGCAGGAC CGTTTCCCGC GCCATGTCAT CGTCTGGCCG
GTGCGCGTCC AGGGCGAGAC GAGTGCGGCG GAAGTGGCCG CCGCGATTCG CGGCTTCAAC
GCGATGGAGA AGGGCGGGAA GACACCGAGG CCGGATTTGC TGATCATCGC GCGGGGCGGC
GGCTCGATAG AAGACCTCTG GTCGTTCAAC GAGGAAATCG TCGTGCGGGC GGCGGCGGAA
AGCGCGATCC CGCTGATCTC GGCCATCGGC CACGAGACGG ACACGACGCT GATCGACTTC
GCCTCCGACC GCCGCGCGCC GACGCCGACG GCAGCCGCGG AAATGGCGGT GCCGGTGCGG
GCGGAACTCC TCGCCGATGT GCGGGACAAG GGCTCGCGGC TCATCCGCTG CGAGGCCCGC
GCCATCGAAA GCTACCGCAC GCAACTGGGC GGGCTGGCGC GCGGCCTGCC GAAGCTGCAG
GACCTGGTGG CGCTGCCCCG CCAACGCTTC GATACGGCGG CGGACCGGCT CGGCCGCGCA
TTGATAAGGG CGGCGGAAGT GAAGCGCGCG CGGCTTTCCC GCGTCGAGGG GCGGCTCTCC
GACCGGCCGA TAAGGCTGCG GATCGCGAAT GAACGGAAAG GCCTGCCGCA ATTGCTGCAA
CGGCTGACGC GGGCGGAGAC AAGACGCGTC GCCGATCTCG CCCGCTCACT CGATGGCTCC
ACGAAGCTGC TGGAGAGCTA TTCCTATCAT GGCGTGCTGA AGCGCGGCTA TGCGGTGGTG
CGCGACGAGA CGGGCAAGCC CATCCGCGCC GGCGCGGGAC AGACGGCGGG CGCGCGCATC
GAAATCGAAT TCGCAGAGGA CAGGCTCGAC GCCGTGGTCG CGCCCGGCGG CACCGTCGCG
CCGCGAAAGG CCCCGCCAAA AAAGCCCGGC GGCGGACAAG GCAGCCTGCT TTGA
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| Protein sequence | MPPSDTQSPA ANNAHEFSVS EISFALKKTV EETFGHVRVR GEITGYRGPH SSGHCYFGLK
DDKARMDAVI WKGNFGKLRF KPEEGMEVIA TGKLTTYPGS SKYQIVIDHL EPAGVGALMA
LLEERRKKLA AEGLFAAERK RALPFLPEVI GVVTSPTGAV IRDILHRLQD RFPRHVIVWP
VRVQGETSAA EVAAAIRGFN AMEKGGKTPR PDLLIIARGG GSIEDLWSFN EEIVVRAAAE
SAIPLISAIG HETDTTLIDF ASDRRAPTPT AAAEMAVPVR AELLADVRDK GSRLIRCEAR
AIESYRTQLG GLARGLPKLQ DLVALPRQRF DTAADRLGRA LIRAAEVKRA RLSRVEGRLS
DRPIRLRIAN ERKGLPQLLQ RLTRAETRRV ADLARSLDGS TKLLESYSYH GVLKRGYAVV
RDETGKPIRA GAGQTAGARI EIEFAEDRLD AVVAPGGTVA PRKAPPKKPG GGQGSLL
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