| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0606 |
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| Symbol | |
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| ID | 5456182 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 669815 |
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| End bp | 672106 |
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| Gene Length | 2292 bp |
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| Protein Length | 763 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640876175 |
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| Product | 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase |
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| Protein accession | YP_001411886 |
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| Protein GI | 154251062 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0620] Methionine synthase II (cobalamin-independent) |
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| TIGRFAM ID | [TIGR01371] 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 0.386502 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATTGA CCAGCACTCT CGGCTATCCG CGCGTCGGCC CGCATCGCGA GCTGAAGGCC
GCGCTTGAAA CCTATTGGCG CGACGGCGAG GAAGCGCCGC TTCTCGATAC GGCAAAGTCA
CTGCGCCGTG CCTCGTGGCG GCTTCAGAAG GAACACGGGA TCGGCCATAT CCCGTCGAAC
GATTTCACGC TCTACGACCA TGTACTCGAC ACGATCTGCA TGACGGGTGC GGTGCCGGAG
CGGTTCGCTG CGGGAGCGGA AATCGATCTC GCCACCTATT TCGCGATGGC GCGCGGCGCA
CAGGACGGCA CGCGCGATGT GGCGGCGATG GAGATGACCA AATGGTTCGA CACCAACTAC
CACTACATCG TGCCGGAATT TTCTCCGGAG ACGAATTTCC GGCTGGCCTT CACCAAAGCC
ATCGATGAAT TTGCCGAAGC GAAGGCGCTT GGTGTTCACA CGCGGCCGGT TCTTGTCGGG
CCTTTCTCGT TCCTGAAACT TGGCAAGGCG ACGGTGGCGG GCTTCGACCC GCTCGACCTG
ATGGGACGAC TCCTTCCCGT ATACGAAAAC GTGCTGAAGC GTCTCGCCGA AGCCGGTGCC
GATTGGGTGC AGATCGACGA ACCCTGCCTG GTGCTTGAAC TCGGCAGCGG CGACCTTGCG
AAATGCCGAG CGGCCTATTC GGCTCTGTCG GCCGCCGCGC CCTCCCTGAA GCTGATGGTC
GCGACCTATT TCGGCGCATT GCCGGAAGCC TCGCTCGAAA CGGCAATGGC GCTGCCGGTT
GCCGGTATCC ATCTCGACAT GGTGCGGGGA CGCTCCCAAT ACGAAGCGGC GCTCTCGGCC
CTGCCGCGCG ACAAGCTGCT GTCGCTCGGG CTCGTAGACG GGCGCAATAT CTGGCGGACG
GACATGGAAG CGGCGTTGAC GCTGGCTGAG CGCGCCGTGC TGACGCTCGG GCCCAAGCGC
GTCATGATTT CGGCGGCCTG CTCGCTGCTG CACGTGCCCT TCAGCCTCGC CGGTGAAAAA
TCGCTCGATC CCGAATTGAA GAGCTGGCTT GCCTTTGCCG AGGAAAAGCT CGGCGAACTT
GCCGTGCTGG CGCGGGGCGT GAAGGAGGGC CGCACCTCGA TCTCCACCGA ACTGGCGGAG
AACGCGGCAT TGTTCGAGGC GCGGCGCAAT TCGCCGCGTA TTCACAATCC AGCTGTCCGC
GCGCGGGTGC GGGATATCGA TCCCCATGCC GACCGGCGGG GCCGCCCCTT CGCCGACCGG
CAGTCTATCC AGCAGAAGCG CTTCGGCCTG CCGAAGCTGC CGACCACGAC CATCGGCTCG
TTCCCGCAAA CCTCGGATGT GCGCAAGGCC CGCGCCAGCC TGCGGCGCGG CGACTGGAAC
GAGGCGCAGT ATGACGCCTT CATGAAAGCC GAAATCGAAA AGACAATCCG CCTGCAGGAA
AGGATCGGGC TGGACGTGCT GGTGCATGGG GAACCGGAAC GCACCGACAT GGTGGAATAT
TTCGGTGAGA AACTGGAGGG CTTTGCGTTT ACGTCGCTCG GCTGGGTGCA GAGCTACGGC
TCGCGTTGCG TGAAGCCGCC GATCATCTTC GGCGATGTGT CGAGGCCGGA GCCGATGACG
GTCGAATGGT CGCGCTACGC CCAGTCGCTG ACGGACAGGC CGGTGAAGGG CATGTTGACC
GGCCCGGTGA CGATCCTGCA ATGGTCCTTC GTGCGCGACG ACCAGCCGCG CAGCGAGACT
TGCCGCCAGA TCGCACTGGC GATACGCGAC GAGGTCTACG ACCTCGAAGC GGCGGGCCTC
GGCATGATCC AGATCGATGA GCCGGCACTC CGCGAGGGAT TGCCGCTGCA TCGCTCCGAA
TGGGACACCT ATCTCCGGTG GGCATGCGAG TGCTTCCGCC TCTCCGTCTG CGTCGCTCGC
GACGAGACGC AGATTCATAC CCATATGTGC TATTCGGAAT TCAACGACAT CATCGAGGCG
ATCGCCGATC TCGACGCCGA TGTGATTTCC ATCGAGACGT CCAGGTCGCG CATGGAATTG
CTCGACGCCT TTGTCGACTT TTCCTATCCG AACGATATCG GTCCCGGTGT TTACGACATT
CATTCGCCCC GCGTCCCCGC GCGCGGCGAA ATGCTGTCGC TTCTGCGGCT CGCCGCCGAA
CGCCTGCCGA GCGAGCGCAT ATGGGTCAAT CCGGATTGTG GCTTGAAGAC GCGGGGCTGG
CCGGAAACGG AAGCGGCACT CGTCGAGATG GTCGAAGCGG CGCGGGAGTT GCGAAACGCC
ATCGGTGCTT GA
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| Protein sequence | MTLTSTLGYP RVGPHRELKA ALETYWRDGE EAPLLDTAKS LRRASWRLQK EHGIGHIPSN
DFTLYDHVLD TICMTGAVPE RFAAGAEIDL ATYFAMARGA QDGTRDVAAM EMTKWFDTNY
HYIVPEFSPE TNFRLAFTKA IDEFAEAKAL GVHTRPVLVG PFSFLKLGKA TVAGFDPLDL
MGRLLPVYEN VLKRLAEAGA DWVQIDEPCL VLELGSGDLA KCRAAYSALS AAAPSLKLMV
ATYFGALPEA SLETAMALPV AGIHLDMVRG RSQYEAALSA LPRDKLLSLG LVDGRNIWRT
DMEAALTLAE RAVLTLGPKR VMISAACSLL HVPFSLAGEK SLDPELKSWL AFAEEKLGEL
AVLARGVKEG RTSISTELAE NAALFEARRN SPRIHNPAVR ARVRDIDPHA DRRGRPFADR
QSIQQKRFGL PKLPTTTIGS FPQTSDVRKA RASLRRGDWN EAQYDAFMKA EIEKTIRLQE
RIGLDVLVHG EPERTDMVEY FGEKLEGFAF TSLGWVQSYG SRCVKPPIIF GDVSRPEPMT
VEWSRYAQSL TDRPVKGMLT GPVTILQWSF VRDDQPRSET CRQIALAIRD EVYDLEAAGL
GMIQIDEPAL REGLPLHRSE WDTYLRWACE CFRLSVCVAR DETQIHTHMC YSEFNDIIEA
IADLDADVIS IETSRSRMEL LDAFVDFSYP NDIGPGVYDI HSPRVPARGE MLSLLRLAAE
RLPSERIWVN PDCGLKTRGW PETEAALVEM VEAARELRNA IGA
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