| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0602 |
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| Symbol | |
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| ID | 5456988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 665684 |
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| End bp | 666511 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640876171 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001411882 |
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| Protein GI | 154251058 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.111601 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 0.208822 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATCT CGCGCAAGGC GCTGATTACG GGCGCAGGCG GCGGCATCGG CTCGGCGATT
TCGCGGGCGC TCGATGCTCG CGGCTACAGC CTCATCCTTG TGGACCGTGA AATGGCGCCG
CTCGATGCGG TTGCTGCCAC TCTCCGCGCC GCGCCTGAAA AGATACTCTG CGATCTTTCC
TCGCGGGAGG AGGTGGAGCG GCTCTGCGAC CGGCTCGGCA GAGAACACGC CGATCTCGAC
GTGCTCGTCA ACAATGCCGG CATCGTCGTG CCGGGTGCCG TGACCGGCCT CGATCAGGCG
GCGCTCGACC TTCATCTCGA AATCAATCTT CGCGCGCCGA TCAGGCTCAT GCGCGCCGCG
GCACCGCTGA TGATCGCCCG CCGGCGGGGT GCGATGGTCG CCACCGTCTC CCTCGGCGGC
GTCATTTCGC TCAAGGACAG CGCCATCTAC TCCGCCTCCA AGTTCGGCCT GCGCGGCTTC
CTTTGCGGCT TTCATCAGGA ACTTGCGCCG CTCGGCGTGA AAGTCTCCGG CGTCTATCCT
GCCGCCGTCG ACACGCCCAT GCTTCATCAC GAGGCGTTGC ATGGCGGCTC GGTGCTCAAT
TTCGTCGACA GGGTGATGAC GCCCGAAGAT ATCGCCGCCG CGACGCTCAA GGCCATCGAC
ACGGGCAGAC TCGAAGTCTA TTCGCCCTGG AGTGCCAGCC TCATGGCGCG GTTGTTCGGT
TCGTTTCCGT GGATGATCCG GCCCATCCTG CCGCTCATGG AGAAGCTCGG CGAACAGGGT
CGGCGGAAGT TTCTCGCCCG GAAGGACCTC TCAGCCCAGC AGCATTAA
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| Protein sequence | MSISRKALIT GAGGGIGSAI SRALDARGYS LILVDREMAP LDAVAATLRA APEKILCDLS
SREEVERLCD RLGREHADLD VLVNNAGIVV PGAVTGLDQA ALDLHLEINL RAPIRLMRAA
APLMIARRRG AMVATVSLGG VISLKDSAIY SASKFGLRGF LCGFHQELAP LGVKVSGVYP
AAVDTPMLHH EALHGGSVLN FVDRVMTPED IAAATLKAID TGRLEVYSPW SASLMARLFG
SFPWMIRPIL PLMEKLGEQG RRKFLARKDL SAQQH
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