| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0590 |
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| Symbol | |
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| ID | 5455722 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 647342 |
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| End bp | 649369 |
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| Gene Length | 2028 bp |
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| Protein Length | 675 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640876159 |
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| Product | parallel beta-helix repeat-containing protein |
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| Protein accession | YP_001411870 |
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| Protein GI | 154251046 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 0.418556 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGGT TGAGCCGCCT TTTGTTTGCA TTGCCATTTT CAGTATCGCT CGCCGCCGCG
GCGCCGGCTT TCGCCGAGAG CGCCGCGAAA TGGGGGCCGT GGATCGAGGC CGGCGGCTTT
CTCTCCACGG AGCGCGATCG CGGCGAAGCC ACCGCTTTCA TGCCCCTCTT CCAGAGCGGC
GAGAGCCTCC TCTTCGCCGA TGTGAAGGGC AAACTCTTCA GCGAGGGCGT CACGGAAGGC
AATTTCGCGC TCGGCTATCG CCGGATGACG GCGTGGGACG TCAATCTCGG TCTCTGGGGC
GGCTACGATA TTCGCGAGTC CGTCTCCGGC AACACATTCG ATCAGGCGGC GTTCGGCATC
GAGGCGCTTG CCGCCGACTA CGATTTCCGG CTCAATGGTT TCGTGCCGCT CGCCGATGGC
AAGGCGGCGC CGGGCATGGC CCGTGTGGAA TTGAGCGGTT CGCAAATCCT CCTCACCGGC
GGACGCGAGC TTGTGCTTGG CGGCTTCGAG GGCGAAGTCG GCTGGCGCCT GCCGCTCGAG
GCGCTCGGCG CGGATCGCGA GCGTCATGAA TTCCGTCTCT ATGCGGGCGG CTATCGCTTC
GACGACAGCG ACCTCGCCAA GCCGGTGCAG GGGCCGAGGC TGCGCGCGGA ATGGCGCATT
CTGGATGCGG TGCCGGGCCT TGCCGGCTCG CGGCTTTCCT TCGAAAGCAG CTTCCAGCAT
GACAGCTACC GCCACGACCA ATGGGAAGCG GGCTTCCGCC TGCGGATTCC GCTTTATGGC
GGCGATGCGG CGAAGACCCT CTCGCCCGTC GAGCGGCGCA TGGCCGAACC CATCATCCGC
GACACGGATA TCGTCACCGC GCCGAGCCGC GCCGAAAAGG TCGCAGATGC GCTGACGGGC
ACCGTCTTCG AGAATGTCGT GCGCGTGGAT TCAACGCAGG ATCTCTATGC CGCAACCCAT
GCCGCCGGTG CGAACAGTCT CGTCCTGCTC GATGGTTCGG CAGGCGCCGT CGCCGCCTCG
GGCATCGTCC TAGATGGCGA CCGCACGCTG GCGGGCGGCG GATCTCAGCT CGCGCTGCGC
GGCGTCGCCT CCGGCATCGC CGTCACCTAC ACCGTCCCCG GCGCCGCGCC GACATTGCTT
GGCGGCGGTT GCGGCTGCGA CGACATGCTG CTCCTCCATG GCAGCAACAC GCATGTCACC
GGTATCGCCT TCGATGGAAA TTCCGGTATG GCCAATTCGG GCATCGTGGT CGGCAATAAT
AAAGGCAACA TCCACCTGAC GAACCTCTCC CTGTCGGATC TGTCGGGCGG CGGCATCGAT
CTGGGGATGG GCAACGGGAT CGTCATGGAC AATGTCCATA TGTCGCGGAT CGGCTTTGCG
GGCGTCATGG CCAATGACCG CAACACTATC GTGATGCGGA ACTCGACCAT GGATGACGTC
ATGCTGGCCG GGCTCTATCT CGACACGGAT AATTTCCTCC ATATGCAGAA TGTCGAGATT
TCCAACGTCT CGATGACCGG CGCCCTGTTG CTCAATTCCG GCAATGAAGC CGTGATCGAG
AATGCCGTCT TCAGCGGCAC GGGCGATGCC GCCCTTCTCG CCGTCGATGG AAACATTGTG
CGGGCGAGCG GCCTCACCAT CCGCGATACG GGCGGGCATG GCATCGACCT CTACGACAAC
AACACATTCA TCCTCGAGGA CAGCCTGGTG GAGAATACTT TCGGCTCCTC GCTTTCCGCC
ATGGCGAACA ACGACATCAC CGTGACAGGC GCCACTTTCC GCGATGCGGG TTGGGACGCG
ATCTATCTCC TTGAGGACAA CCGCCTCGCC CTGTCGGATA CGCTGATCGG GGGAACGATC
GGCGGCGACC TCCTCCTCGT GAACGACTTC GGCAATGTTC TTTCCGGCAG CGGCAACGAG
AATGCCGCCA CGGCCGGGGG CACTCTCTGC ACCGCGCCTC CCGGCGGCGT GTCCGGTTCC
ATCGCCTTCA GCGACGGCAG CGTGATCGAG GACGCCACCT GTCACTGA
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| Protein sequence | MSRLSRLLFA LPFSVSLAAA APAFAESAAK WGPWIEAGGF LSTERDRGEA TAFMPLFQSG
ESLLFADVKG KLFSEGVTEG NFALGYRRMT AWDVNLGLWG GYDIRESVSG NTFDQAAFGI
EALAADYDFR LNGFVPLADG KAAPGMARVE LSGSQILLTG GRELVLGGFE GEVGWRLPLE
ALGADRERHE FRLYAGGYRF DDSDLAKPVQ GPRLRAEWRI LDAVPGLAGS RLSFESSFQH
DSYRHDQWEA GFRLRIPLYG GDAAKTLSPV ERRMAEPIIR DTDIVTAPSR AEKVADALTG
TVFENVVRVD STQDLYAATH AAGANSLVLL DGSAGAVAAS GIVLDGDRTL AGGGSQLALR
GVASGIAVTY TVPGAAPTLL GGGCGCDDML LLHGSNTHVT GIAFDGNSGM ANSGIVVGNN
KGNIHLTNLS LSDLSGGGID LGMGNGIVMD NVHMSRIGFA GVMANDRNTI VMRNSTMDDV
MLAGLYLDTD NFLHMQNVEI SNVSMTGALL LNSGNEAVIE NAVFSGTGDA ALLAVDGNIV
RASGLTIRDT GGHGIDLYDN NTFILEDSLV ENTFGSSLSA MANNDITVTG ATFRDAGWDA
IYLLEDNRLA LSDTLIGGTI GGDLLLVNDF GNVLSGSGNE NAATAGGTLC TAPPGGVSGS
IAFSDGSVIE DATCH
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