| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0576 |
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| Symbol | |
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| ID | 5455969 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 634388 |
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| End bp | 636124 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640876145 |
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| Product | amidohydrolase 3 |
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| Protein accession | YP_001411856 |
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| Protein GI | 154251032 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3653] N-acyl-D-aspartate/D-glutamate deacylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAATG TGGATCTCGT TATCCGCGGC GGCACAGTTG TCGACGGCTC GGGCGGCGCA
CCGCGCGTGG CGGATGTGGC GATCGACAGG GGCGTCATCG TCGAAGTCGG CAAGGTCGAT
GCGAAGGGCC GCGAGGAAAT CGACGCGAGG GGCTTGCTCG TTACGCCGGG CTGGGTCGAC
ATCCACACGC ATTACGATGG TCAGGTGACG TGGGACGAGC GCATGACACC GTCTTCCATT
CACGGTGCGA CGACGGTCGT CATGGGCAAT TGCGGCGTCG GTTTCGCGCC GGTCCGTAAA
TCGGATCACG ACCGGCTGAT CCGTCTCATG GAAGGCGTCG AGGACATTCC GGGCGCGGCG
CTTCACGAAG GCCTGTCGTG GCAGTGGGAA AGCTTCGGCG ACTATCTCGA CGCGGTTGAA
GCGCGCAAGC GCGACATCGA CGTGGCCATA CAGGTGCCGC ATGGCGCGGT GCGCGTTTAC
GTGATGGGAG AGCGCGGCGC GAAGCGCGAG GCGGCAACGG ATGCCGAGAT CGACGAGATG
CGCGAAATCG TGCGCGACGC GATCAAGGCG GGCGCCATCG GCTTTTCGAC CTCGCGCACC
ATCGCGCATC GCACCAGCGA CGGCGACCTG ACACCGACCA TCGGCGCCGC CGACAAGGAA
ATGGAAGCGA TTGCGCAAGG GCTGAAGGAA GCAGGTGCAG GCGTGCTGCA ATGGGTGTCG
GATTTCCGGG AGGTCGATCA GGAATTCTCG CTGGTCGAAC GGCTGGTGGA GATTTCAGGC
CGGCCCCTGA GCTTCTCGCT GGTGCAGGCC GACGTGATGC CGAACCAGTG GCAGGAATTG
CTGGGCCGGC TCGACAAGGC GGCGGGCAGG GGCTTGCCGA TCAAGGCCCA GGTGCAGGGC
CGCCCCGTCG GGCTGATGCT CGGCCTGCAG GGCTCCGTGC ATCCCTTCCT CACGCGGCCG
AGCTACCGCG CGATTGCGGA CAAGCCGCTC GACGAGCGCG TCGCGATCAT GGCCGATCCG
GAGTTCCGCG CGAAGCTGCT CTCGGAAGAT CTTGAGCCCG GCCACCCGTT CCTGAATTCG
CTGGCGGGCG CCTATCACAA GATGTTCGAG CTTGGCGATC CGCCGAACTA CGAGCCCGCG
CCGGAAGACA GCATCTGCGC GCGGGCGAAG CGGACGGGGC AAAACCCTGA CGAAATCGTC
TACGACATAT TGACGGCGAA TGGCGGACGG AACTTCCTGT TCTTCCCGCT GCATAATTAT
TTCGAGTTCA GCCTCGAAAA CGCGCTGACC ATGATGCGCA ATCCGAACAC GCTGTTCGGC
CTTTCGGATG GCGGCGCGCA TGTCGGCGTG ATCTGCGACG TCAGCGTGCC GACCTATATG
CTGACACATT GGTGCCGCGA CCGGACACGG GGCGAACATC TCGATCTTCC CTTCGTGGTA
AAAAGCCAGA CGCGCGACAC GGCGGAAGCC GTGGGCCTGC TCGACCGCGG AATGATCGCG
CCGGGCATGA AGGCGGATGT GAACCTGATC GACTTCGATC GGCTGCGGTT GCTGCCGCCG
CACATGGTCT ATGACCTGCC TTCAGGCGCC CGCCGCCTGA TGCAGGAAGC GGAAGGCTAT
GTCGCGACCA TCGTCAGCGG CGAGGTGATC TACCGAGAGG GCAAGCATAC CGGCGCGCTG
CCGGGCAAGC TCGTGCGCGG CCACAAGCAG GCGCCCGTGC GGGCCGCGGC CGAATAG
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| Protein sequence | MSNVDLVIRG GTVVDGSGGA PRVADVAIDR GVIVEVGKVD AKGREEIDAR GLLVTPGWVD
IHTHYDGQVT WDERMTPSSI HGATTVVMGN CGVGFAPVRK SDHDRLIRLM EGVEDIPGAA
LHEGLSWQWE SFGDYLDAVE ARKRDIDVAI QVPHGAVRVY VMGERGAKRE AATDAEIDEM
REIVRDAIKA GAIGFSTSRT IAHRTSDGDL TPTIGAADKE MEAIAQGLKE AGAGVLQWVS
DFREVDQEFS LVERLVEISG RPLSFSLVQA DVMPNQWQEL LGRLDKAAGR GLPIKAQVQG
RPVGLMLGLQ GSVHPFLTRP SYRAIADKPL DERVAIMADP EFRAKLLSED LEPGHPFLNS
LAGAYHKMFE LGDPPNYEPA PEDSICARAK RTGQNPDEIV YDILTANGGR NFLFFPLHNY
FEFSLENALT MMRNPNTLFG LSDGGAHVGV ICDVSVPTYM LTHWCRDRTR GEHLDLPFVV
KSQTRDTAEA VGLLDRGMIA PGMKADVNLI DFDRLRLLPP HMVYDLPSGA RRLMQEAEGY
VATIVSGEVI YREGKHTGAL PGKLVRGHKQ APVRAAAE
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