| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0575 |
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| Symbol | |
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| ID | 5456314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 632878 |
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| End bp | 634263 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640876144 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001411855 |
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| Protein GI | 154251031 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCAC CGCTTTCGCG ATCCAGCATC TATATGCATG GGTCGATCGG CCTGCCGATC
GCCATGTTCG GCTATCCGGT CGCAGTCTGG CTGCCGCCTT TTTATGCAGG CGAGCTTGGC
GTTTCGCTCG CGGCGGTGGG CACCATGATC ATGCTGGCGC GGCTCACAGA CGTCGTCACC
GATCCGCTCA TCGGATATTT CTCCGACCAT ACGCATACGC GTATCGGCCG CCGCAAGCCC
TTCATGCTGC TTGGCCTGCC GATCCTGATG GTCGGCGTGC TCTTTCTTTT CATGCCGCAT
ATTTTCGGCT TTTCGTCGGT CGGCAGCGTC TATCTGCTCG CCTGGCTCGG CATCATGTTC
ATCGGTTCGA CGCTGGTCTA CATCCCCTAT TTCGCATGGG GCGCGGAACT TTCGCCCGAT
TATCACGAAC GCTCGCGCAT AACCGCCTCG CGCGAATTCT ATGTGCTGGT GGGCTTGATG
CTATCCGCGC TCATCCCGGC GCTGCTGCCC TTCATCATCG AAGGGCCGGC GACGCCGCGG
CCCGTGCTGA CCGCTATGGC CTGGACGATC ATCATCCTGA CGCCGCTGAC TGTCATCCTT
GTCTGCTGGC GCGTGGCGGA GCCCGCCCAT GTGAAAGTGT CGCGCCAGGT GCCGCTGCTG
GAAGGCTTGC GCCATGTCGG CAGAAACGGG CCGATGGTGC GCGTGCTCGC CATCGTGCTG
ATCGTGACCG GCGGCGAAGC GTTCCGCAAC GCGCTCTCGC TCTTCTTCAT GCGCGACTAT
ATCGGCGTCA CCGGCGTCGG CATGCTCTAT CTCTATTATT TCGCGGCGGG CCTTCTCGCC
ATTCCGGGCT GGCTCTGGCT CGGCCGACGG ATGGGCAAGC ACAAGGCCTT CGCCATCTGC
ATGGCGGCGG CGGCCAGCCT TTCCACCATC GCCTTCTTCC TCGTGCCCGG CCAGACGCAG
ATTTTCACGG CCATGTTCAT TGCCAAGGGT CTCTGCTTCG GCGGGTTGCA ATTCCTGCCG
CTCGCCATGC TCGCCGATGT GGTAGACGTC GACACCGCCC GCTCCAAGGG CAAGCGCGCC
GGAACCTTCT TCGCCATTTC GGGCATGACG ACGAAACTCG CCACCGCCTT CGGCACCGGC
ATTTCGCTCA ATGTGGTCGC CTTCTTCGGC TTCAATCCTT TACCCGGCGT GGTCAACGGG
CCGGACGAAT TCTGGTGGCT CACCTTTGCC TATGCGGTGA TCCCCTCGGT CTTCTTCATC
GCCGCGCTCT GGCTCACCTG GACCTATCCG CTCACCTCCG AGCGCCAGAA GCGCCTGCGC
GGCCTTATCG AGCGCCGAAA CACGCGCCTT GCGCAGGAAG CTGCGATCAA CCGCTCCGCG
GATTGA
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| Protein sequence | MTAPLSRSSI YMHGSIGLPI AMFGYPVAVW LPPFYAGELG VSLAAVGTMI MLARLTDVVT
DPLIGYFSDH THTRIGRRKP FMLLGLPILM VGVLFLFMPH IFGFSSVGSV YLLAWLGIMF
IGSTLVYIPY FAWGAELSPD YHERSRITAS REFYVLVGLM LSALIPALLP FIIEGPATPR
PVLTAMAWTI IILTPLTVIL VCWRVAEPAH VKVSRQVPLL EGLRHVGRNG PMVRVLAIVL
IVTGGEAFRN ALSLFFMRDY IGVTGVGMLY LYYFAAGLLA IPGWLWLGRR MGKHKAFAIC
MAAAASLSTI AFFLVPGQTQ IFTAMFIAKG LCFGGLQFLP LAMLADVVDV DTARSKGKRA
GTFFAISGMT TKLATAFGTG ISLNVVAFFG FNPLPGVVNG PDEFWWLTFA YAVIPSVFFI
AALWLTWTYP LTSERQKRLR GLIERRNTRL AQEAAINRSA D
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