| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0573 |
|---|
| Symbol | |
|---|
| ID | 5453712 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | - |
|---|
| Start bp | 630805 |
|---|
| End bp | 632070 |
|---|
| Gene Length | 1266 bp |
|---|
| Protein Length | 421 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640876142 |
|---|
| Product | luciferase family protein |
|---|
| Protein accession | YP_001411853 |
|---|
| Protein GI | 154251029 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 63 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTCA CATGGTTCAA TTTGATGCCT TGGCCCTACC TGCCGGACGA TTTCCGGGAG
AAGCATCGTT CGGTCTGGGT GGATATCGAC TCGCGCCTGT TCGATCCGGC AAAGAGCCAC
GAAGTCTACA ACTCCTACAT GGACATGCTC GAATATGCGG GCACGCTCGG CTTCGACGGC
ATCGGCGTCA ACGAGCATCA CCAGAATGGC TACGGCATCA TGCCATCGCC AAACATCATC
GCGGCAGGTC TCGCGCGGCG CACATCGGAT GTCGGTCTTG TCGTGCTCGG CAATTCGATC
GCGCTCTACA ATCCGCCGAC GCGCGTCGCG GAAGAATTCG CGATGCTCGA CTGCATTTCC
GGCGGCCGCC TCGTCGCCGG TTTCCCGGTC GGCACCTCGA TGGACACCAA CTACTGCTAC
GGGCAGATAC CCGCGCTCAC CCGCGAGAAA TATCAGGAAG CGCATGATCT CATCCGCCGC
GCCTGGTCGG ACCCCGATCC TTTCGCGTGG AATGGACGCT ACAACAAGCT CCGCCACGTC
AACATCTGGC CGCGCCCGAT CCAGGACCCG CCGCCGATCC ATATTCCCGG CGGCGGTTCG
GTGGAGACCT ATGATTTCTG CATCGACAAT ACCTATTCCT ATTCCTACCT CTCCTTCTCC
GGCTACATCC GCGCCAAGGC GCTGATGCAG GGTTATTGGG ACCGCGTCGC CCAGCGCAAC
GCGCCCGACG AGAGCCCCTA CCGCGCCGGC TTCGCGCAGA CGATCTGCGT CGCCGATACG
GACGAGGAAG CCGAGCGGCT CTACTCGGAG CATGTCAGCT ACTTCTACAA CCGCTGCCTC
CATGTCTATG GCGGCTTCGC GGATGCGCCG GGCTACCGCA CCATCAAGAC GATCCAGACC
GGTGCGCTGT CGCAATATGC GCCGCCCATC GGCGGCTATT CGGAACTCAC CTGGAAAGAC
CTGATCGAGC AGGGCCATGT GATCGCGGGC AGCCCCGAGA CGGTTCGCCA GCGCATGGAA
GACCTCATCA AGGGTCTCAA TGTCGGCAAC ATCTTCTGCC TTCTCCATGT CGGCAACATG
CCGATGGACA AGTGCATGCA CTCGACGAAG CTCTTCGCCG AGAAAGTCAT GCCGCATCTC
CGCGATATGT TCCCGGACTA CAAGGACGAC AACCGCTTCT GGTGCAAGCC GCTTGCGAAG
CGCGCGAAGC CGGGCAGCCT GCCGGCCGAT AAGGAAATCG CCGCGATGGT CGGAGGGAAG
GACTGA
|
|---|
| Protein sequence | MKFTWFNLMP WPYLPDDFRE KHRSVWVDID SRLFDPAKSH EVYNSYMDML EYAGTLGFDG
IGVNEHHQNG YGIMPSPNII AAGLARRTSD VGLVVLGNSI ALYNPPTRVA EEFAMLDCIS
GGRLVAGFPV GTSMDTNYCY GQIPALTREK YQEAHDLIRR AWSDPDPFAW NGRYNKLRHV
NIWPRPIQDP PPIHIPGGGS VETYDFCIDN TYSYSYLSFS GYIRAKALMQ GYWDRVAQRN
APDESPYRAG FAQTICVADT DEEAERLYSE HVSYFYNRCL HVYGGFADAP GYRTIKTIQT
GALSQYAPPI GGYSELTWKD LIEQGHVIAG SPETVRQRME DLIKGLNVGN IFCLLHVGNM
PMDKCMHSTK LFAEKVMPHL RDMFPDYKDD NRFWCKPLAK RAKPGSLPAD KEIAAMVGGK
D
|
|---|
| |