| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0570 |
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| Symbol | |
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| ID | 5455255 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 627055 |
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| End bp | 628632 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640876139 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001411850 |
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| Protein GI | 154251026 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.356446 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGATAG CGGAAGCGCG CGCGTGGAGC CGCGAAGAGG CGGCTGCTGC GGGCATGGTG
CTGGCATGGC ATGCGGCACA GGCGCCGGAG AAGCCCGCCA TCCTGTCGGA AGCGGGCAAC
CGGACATTCG GCGAGCTGAA CGCGCGGGCG AACCAGCTTG TTCGCGCTTT GCGGCGAGCG
GGGCTGAAGG CGGGCGACGC GGTGGCGCTG CTCTGTTCCA ACCGTCCGGA ATTCGTGGAG
ACGGTGGCGG CCTGCCAGCG CGGCGGCTTT CGCCTGACGC CGGTGAACTG GCATCTCAAG
GGCTCGGAAG TCGGCTATAT CGTCGATAAT TGCGAAGCGA AAGCCTTCGT CGCCGATGCG
CGCTTTCCGG CATCGGCCAT GGAAGCGGCG CGCATGTCGC CGGGGCTCGT CGTGAAGCTT
GCCGCCGGTG GCGAGATCGA GGGCTTTACC TCCTATGATG CGGCGGTGGA GGCCGAGGAC
GGTGCCGACC TTGCGGACCC GGCGCTCGGA ACGCAGATGA TGTACACCTC CGGCACCACG
GGACATCCAA AGGGCGTCTT CCGGCGCCAG GCGGCGCCTG TATCGCCGCT GCTGGTGAAG
CTGACGGAGA CGGCGGCTTT TCGCGACGGT GACATGGCGC TGGTGACGGG CCCGCTTTAT
CACGCGGCGC CGCTCGCACT GAACCTCAGC TTTCCGATCA ATGCCGGCGT CGGCTGCGTG
CTGATGGACA AATGGGACGC GGAAGAGACG CTGCGGCTTG TCGAGGAATA CCGCATCACG
CATACGCATG TCGTGCCGAC CATGCTGCAC CGGATGCTGC AACTGCCGGA GGCGACGAAG
GCGAAATACG ACACGTCCAG CTTGCGCTGG ATCCTGCATG GCGCGGCGCC TTGCCCCGCG
CATGTGAAGG AGGGCTCGAT CGTCTGGTTC GGACCCGTGG TCTTCGAATA TTACGCGGCG
ACGGAAGGCG GCGGCATTTT CGTCGACAGT CACGAATGGC CGGAGAAGAA GGGCACCGTC
GGCAAGCCGC TGCCCGGCGT GATCGTGGAA GTGCATGACG AGGACGGCAA GCCGGTGAAG
CCGCGCGATG TCGGCACGAT CTACTTCAAG GCGCCGGAAC AGGGCCGCTT CGAATATTAC
AAGGCGCCGG AAAAAACCGA GGGCGCCTAT CGCGGCGATT TCTACACGAT GGGCGACATG
GGCTACATCG ACGAGGACGG CTTCCTGTTT CTCACCGGGC GCAGCGCCGA AGTCATCATC
TCCGGCGGCG TGAACATCTA TCCCGCCGAA ATCGACCAGG AGATTTTGAA GCATCCGGCA
GTGGCCGACG CGGCGGCGGT CGGCGTACCC AATGAGGAAT GGGGCGAGGA GGTGAAGCTC
GTCGTGGAAC TGAACGAGGG CTATCGCGCG GACGATGCGA TGGCGCGCGA GCTCCTCGAC
TTCGCGGCGG CGAACCTGCC GGGCTATCAG CGCCCGCGCT CGGTGGACTT CATGCAGGAA
TTGCCGCGCA TGCCGAGCGG CAAGGTGCTG AGACGCAATA TCCGCGACGC CTACTGGCAG
GGCGAGAAGA AGATCTGA
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| Protein sequence | MAIAEARAWS REEAAAAGMV LAWHAAQAPE KPAILSEAGN RTFGELNARA NQLVRALRRA
GLKAGDAVAL LCSNRPEFVE TVAACQRGGF RLTPVNWHLK GSEVGYIVDN CEAKAFVADA
RFPASAMEAA RMSPGLVVKL AAGGEIEGFT SYDAAVEAED GADLADPALG TQMMYTSGTT
GHPKGVFRRQ AAPVSPLLVK LTETAAFRDG DMALVTGPLY HAAPLALNLS FPINAGVGCV
LMDKWDAEET LRLVEEYRIT HTHVVPTMLH RMLQLPEATK AKYDTSSLRW ILHGAAPCPA
HVKEGSIVWF GPVVFEYYAA TEGGGIFVDS HEWPEKKGTV GKPLPGVIVE VHDEDGKPVK
PRDVGTIYFK APEQGRFEYY KAPEKTEGAY RGDFYTMGDM GYIDEDGFLF LTGRSAEVII
SGGVNIYPAE IDQEILKHPA VADAAAVGVP NEEWGEEVKL VVELNEGYRA DDAMARELLD
FAAANLPGYQ RPRSVDFMQE LPRMPSGKVL RRNIRDAYWQ GEKKI
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