| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0563 |
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| Symbol | |
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| ID | 5455237 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 619195 |
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| End bp | 620379 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640876132 |
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| Product | cytochrome c oxidase subunit II |
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| Protein accession | YP_001411843 |
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| Protein GI | 154251019 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2 |
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| TIGRFAM ID | [TIGR02866] cytochrome c oxidase, subunit II |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGATC AGCTTTCCGC CATGCCAGCC GGCAAGCCCG GTGAGCCCTG CCGCGAGGAG
CGACAGGAGA AGCCCATGCG GCAGCACGGC GTCGGGCGCG GCGAGGCGGA GGCCCCAATT
GAGACCGGCG ACCGAGATGA GCATCATCGC GGCAACGCCA TGCGCCCAGC TTGCGACGCG
GCCGCGAATG CCGGGCACAA GGAGAAGCTC CGCCGTGCCG ACAAGGCCCG CGCCGATGCC
GGAGGCGAAG GCGAAGCCCG CCGCCCAGAG GCCCGCACGG AGCCAGAAGG GATCGGCGCT
CCACCAGTAG AAGACATCCG CGCCGAGCGT CGCGATGACG AGGGCTATGG GGAAGTGGAC
GCTCATCGCA TGAAGCGGAT GGCCCGCCAC CGCGATGGCG GAGCTGACAT CCATTTCCTC
GATCTTCGCC TCGACCGGGT TTTCCGGGTT GTCGGTTTCG CTCATGACAC TTCTCCCATT
CGGAAGATAA CCCTTTTGCG GCGCGGTCCG TTCCGTCGCG CGGCGGCGAT TTGCGCGGGC
GCGGCGCTTT CCGGCTGCAG CGGCGACCTT TCGGCGCTCG ATCCGGCGGG GCCGGCGGCG
CGCGACATAG CGGCGCTCTG GTGGGCGATG CTGGCGGGGA GCGCCGTGCT TTTCCTGCTG
GTGATGGGGC TTTTCGCGGC GGCCATGCTG AAGCCCGGCT TCGGCAGCCG CTATGCCGCG
AAGACGTGGA TCGTGGCGGG CGGCATTCTC ATGCCTGTGC CGGTGCTGGC GCTGCTGCTC
TTCTTCGCCT TCGCGATGGG CGAGCGGCAT CTGCCCTGGC GCGGCGAGCA CAACCCGGTG
CGCATCGAGG CGCGGGCGCA TATGTGGTAC TGGGAATTCC ATTACCTCGA CTACCCGGAT
GCCGCGCCCA CCATCGGCGT GATGCATATG CCGGCCCAAT ATGATGTCGA TGTGATCGCA
ACGAGCGACA ATGTCATCCA CGGATTCTGG GTGCCGCGGC TCGGCGGCAA GGTGGATGCA
ACGCCGGGGC ACGAAGCGGC GGTGCGGCTC TATGCGGATA GACCGGGCGC CTATGGCGGC
GTCTGCGCGG AATTCTGCGG CACCGGCCAC ACGACAATGA CATTTCGCGT CGAGGCGCAC
ACGCCGGAGC AATTCCGCGC GGCGATCGGA GGGAGCGCGC CATGA
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| Protein sequence | MEDQLSAMPA GKPGEPCREE RQEKPMRQHG VGRGEAEAPI ETGDRDEHHR GNAMRPACDA
AANAGHKEKL RRADKARADA GGEGEARRPE ARTEPEGIGA PPVEDIRAER RDDEGYGEVD
AHRMKRMARH RDGGADIHFL DLRLDRVFRV VGFAHDTSPI RKITLLRRGP FRRAAAICAG
AALSGCSGDL SALDPAGPAA RDIAALWWAM LAGSAVLFLL VMGLFAAAML KPGFGSRYAA
KTWIVAGGIL MPVPVLALLL FFAFAMGERH LPWRGEHNPV RIEARAHMWY WEFHYLDYPD
AAPTIGVMHM PAQYDVDVIA TSDNVIHGFW VPRLGGKVDA TPGHEAAVRL YADRPGAYGG
VCAEFCGTGH TTMTFRVEAH TPEQFRAAIG GSAP
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