| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0561 |
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| Symbol | |
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| ID | 5454609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 616716 |
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| End bp | 618467 |
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| Gene Length | 1752 bp |
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| Protein Length | 583 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640876130 |
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| Product | amidohydrolase 3 |
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| Protein accession | YP_001411841 |
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| Protein GI | 154251017 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3653] N-acyl-D-aspartate/D-glutamate deacylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAGC ATGACATCGT GATCCGCGGC GGCGCCGCCT ATGACGGCAC GGGCGCCGCG
CCCGTCGAGG CCGACGTCGC CATTTCCGGC GGCCGCATCG TCGAGATCGG CAAGGTTTCC
GGTTCCGGCG CGGAGGAGAT CGACGCGAAG GGTCAGATCG TGACGCCCGG CTTCGTCGAT
GTGCATACGC ATTATGACGG CCAGGTCACA TGGGACCCCT ATCTCCAGCC CTCCACCTTT
CACGGCGTCA CCACCGCCGT CATGGGCAAT TGCGGCGTCG GTTTCGCGCC CTGCAAGCCC
GAACAACGCG AATGGCTGCT CGGGCTGATG GAAGGCGTTG AGGATATTCC GGGTTCGGCG
CTTGCCGAGG GCATCAAGTG GAACTGGGAG AGCTTCGCGC AATATATGGA TGCGGTCGAA
GCCTCGCCGC TCGCGCTCGA TGTCGGCCTG CAAATTCCGC ATGCCGCCGT CCGCGCCTAT
GTGATGGGCG AGCGCGCGCC CGCGCTTGAG CCCGCCACGG AAGCGGAGAC GGCCGAGATG
GGCCGCCTCG TCGTCGAGGC GCTCGAAGCC GGCGCGCTCG GCTTCTCCAC CTCGCGCACG
GTAAAACACA AGGACGTGAA AGGCGGCGCG ACGCCGACGC TGAAGGCCGA AGCGATGGAA
CTCCACGGCA TCGCGCGCGC CATGGGCAAG GCGCAGAAGG GCGTGCTGCA GCTCATCGCC
GATTTCAAGG ACACGGATGC CGAATTCGCG ATGCTGCGCG GCATGGTGGA GCTTTCCGGC
CGGCCCATGT CCATCACCAT CGAACAGGAT GACCGCTGGC CCACCGTCTG GAAGCGCGTG
CTCGACAATA TCGCCGCCGC CAATCAGGAC GGGCTTCCCA TTCGCGGCCA GGTGCCGCCG
CGCGCCACCG GCGTGCTGCT CGGCCTCACC TCCTCGCTCA ATCCCTTCGT GATGCACCAG
ACCTTCCGCT CGATCTGGGG CGCGCCGCTG GAGCAACAGG TGAAGGCGCT GCGCGACCCT
GAATTCCGCG CGAAGCTTCT CGCCGAGGAG CCGCAATATC CGCAGGGCGA AATCATCGAG
ATGCTCTGCA CCTTCTATCA CAAGATGTTC GCGCTCGGAG AGAACCCGAA TTACGAGCCC
TCGCCCGATG AAAGCGCGAA GGCGCTTGCC GAGCGCACCG GCAAGCATCC GCGCGAAGTG
CTGCTCGACT GGATGCTGGA GCGCGACGGC AAGGCGCTCC TCTATTACCC GCTGATGAAT
TATCACTGCG GCAGCCTCGC CGATGTCGAG ACGATGCTCA CCCATCCGAA CACCGCCTTC
GGCCTTTCCG ATGGCGGCGC CCATTGCGGC ATCATCTGCG ATGCGAGCTT CCCGACCACG
CTCATCACCC ATTGGGGCCG CGACCGCACG CGGGGGCGGA AGCTCCCCCT CGAATGGCTG
GTGCATGGCC TCACCCAGCG CAACGCGGCG CTTGTCGGCA TGAACGATCG CGGCGTCCTC
GCGGCCGGCA TGAAGGCGGA TGTGAACGTG ATCGACTTCG ACAATCTCAC GCTCTATTCG
CCGCGCATCG TCAACGACCT GCCGGCGGGC GGAAAGCGCC TCATCCAGCA GACGGATGGC
TACACGGCCA GCATCGTCTC GGGCGCCGTC GCCTTCCGCA ATGGCGAGCC GACGGGCAAG
CTCAATGGCC GCCTGGTGCG CGGCGCGCAG GCCCGGCCCC AAGGGGTGCG TATTCCAGCC
GCCGCCGACT AA
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| Protein sequence | MSQHDIVIRG GAAYDGTGAA PVEADVAISG GRIVEIGKVS GSGAEEIDAK GQIVTPGFVD
VHTHYDGQVT WDPYLQPSTF HGVTTAVMGN CGVGFAPCKP EQREWLLGLM EGVEDIPGSA
LAEGIKWNWE SFAQYMDAVE ASPLALDVGL QIPHAAVRAY VMGERAPALE PATEAETAEM
GRLVVEALEA GALGFSTSRT VKHKDVKGGA TPTLKAEAME LHGIARAMGK AQKGVLQLIA
DFKDTDAEFA MLRGMVELSG RPMSITIEQD DRWPTVWKRV LDNIAAANQD GLPIRGQVPP
RATGVLLGLT SSLNPFVMHQ TFRSIWGAPL EQQVKALRDP EFRAKLLAEE PQYPQGEIIE
MLCTFYHKMF ALGENPNYEP SPDESAKALA ERTGKHPREV LLDWMLERDG KALLYYPLMN
YHCGSLADVE TMLTHPNTAF GLSDGGAHCG IICDASFPTT LITHWGRDRT RGRKLPLEWL
VHGLTQRNAA LVGMNDRGVL AAGMKADVNV IDFDNLTLYS PRIVNDLPAG GKRLIQQTDG
YTASIVSGAV AFRNGEPTGK LNGRLVRGAQ ARPQGVRIPA AAD
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