| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0560 |
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| Symbol | |
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| ID | 5456473 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 613783 |
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| End bp | 616536 |
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| Gene Length | 2754 bp |
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| Protein Length | 917 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640876129 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_001411840 |
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| Protein GI | 154251016 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG5309] Exo-beta-1,3-glucanase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.922438 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGATA GACCCGACCC TGCCTCCCTG CCGGCCGAGC CCTCGCCGGA TGCCCCCAAG
GACAATCCGC GTTCGTGGCG TCATTCGGTC TTTGTGCGCC AGGCCGCCTT CTTCTTCATC
GTTTTGCCGC TCGTCATCGC CGCCAATCTC GCGGTCTGGG CCGCCTTCAA TCAGCCGCAT
CATGCCGAGG CCTGGACGGG CGAAATCGTC GGCCTCTCCT ACAGCCCCTA TCGCCAGGGG
CAGGACCCGA CGCAGAACCG GCATCCCTCC GTCGCGCAGA TGGAAGAGGA CATGGTGCAG
CTTTCCGGCA CCGTGCAGGC GATCCGTACC TACAGCGTCA TTCGCGGCCA GGAAAACATT
CCCGAGCTTG CTGCCAAATA CGGCCTCTCC GTCGCCGTCG GCGCGTGGAT CGGGCCAGAC
CTTGAGCGCA ATGAGCGCGA GCTCGAAGTC CTCATCTCGC TCGCGCCGCG CCGCAATGTC
GTGCGCGTGC TGGTCGGCAA CGAGGCGCTG CTGCGCAACG ATCTGCCGGT CGAGGATCTG
ATCGAATATA TCAAGCGCGC CAAGGAGAAA ATCTGGAAGC CGCTTTCCAC CGCCGAGCCG
CCGCATATCT GGCTCAACAA TCCCGATCTT GTGGATGCGG TCGACTACAT CGCCGTGCAG
CTCCTGCCCT ATTGGGAAGG CATACCGATC AACGAGGCGG TGAATTCCGT CTTCGAGCGT
CTCGACGAGT TGCGCGAGGC CTATCCGGGC AAACCCATCG TCGTCACGGA AGTGGGCTGG
CCGAGCCGCG GCAAGATCAT TCCGCGCCGG CCTTATCCGG GCCTGCCCGA ATGGGAACTG
AAGACCGAAG CCGTTCCCTC GCTCGTCAAT CAGGCGACCT TCATGCGCGA GTTCCTGAAC
CGCGCAAAGG CCGAAGACAT CACCTATTAC GTGATGGAAG CCTTCGACCA GCCATGGAAG
GCCGCCGAGG AAGGCGCCGC CGGCGCCTTC TGGGGCATCT ACAATGCCGA CCGCCAGCCG
AAATTCCCGA TGGCCGGCAG CATTTCCGAG GCGCCGGAAT GGCGCTTCTG GGCGTCGCTC
GCCGCCGGCC TCGCGCTCGT GCCCGCCATG CTCTTCATGC TGCGCCAGCG CCATGTCCGT
CCCGTCGGCG TCGTCTTCTT CGCGGTGCTG ACGCAGATTG CAGGCTCCGC CATCGCATGG
GCCGGGCTTT CCGTCACCGG CCTCTATTTC ACCTGGGTCG GCATCACGGT CTGGAGCTTC
CTCTTCTTCG CGCAAGGGCT TCTCCTCATC GTCCTTCTTG CCGAAGCGAT AGAGTTCGTC
GAAGTGATCT GGACGCGGCA CGGTTCGCGT CACTTCAAGC CCTTCGATGA AAATGCCGTT
AGCCCCACGG CGATGGTGTC GATCCATGTG CCGATCCATA ACGAGCCGCC GGAGATGGTG
CGCGAAACGC TTCAGGCGCT CGCAAACCTC GATTACGACA ATTACGAAGT GCTCGTGCTG
GACAACAACA CCGTCGATCC CGAAGTCTGG CAGCCGGTGC GCGATTATTG CGCGCAGCTC
GGGCCGCGCT TCCGTTTCTT CCATCTCGAA AACTGGCCGG GCTTCAAGGC GGGCGCGCTC
AATTTCGGTC TGGAAAAAAC CGCCGAGGAG GCCGAGATCA TCGCCGTCAT CGACAGCGAC
TATCAGGTCG AGCCGAGCTG GCTGAAAGTT CTCGTTCCCT ATTTCGACAA GCAGGATGTC
GGTTTCGTGC AAGGTCCGCA GGATTATCGC GACCGTCACG AAAGCGCGTT CAAGAACATG
GCCTATTGGG AATATGCCGG CTTCTTCCAT ATCGGCATGG TCCAGCGCAA CAATTTCAAC
GCCATCATCC AGCACGGCAC CATGACGCAG GTGCGCAAGA GCGCGCTGAA GCGCGTCGGC
GGCTGGGCGG AGTGGTGCAT CTGCGAGGAT GCCGAACTTG GCATCAAGCT CTATCGCGCC
GGCTATGACA GCGTTTACGT GAACCATTCC TTCGGCCGCG GCCTCACGCC GGACACGCTG
TCCGGCTACA TCACGCAGCG TTTCCGCTGG GCCTATGGCG CGGTGCAGAT CGTCAAGCAT
CACTGGGATG CGCTCGCGCC CTGGGCGAGC AGCAAGAAGG GCCTCACCGG CGCGCAGCGT
TATTATTTCC TCGCCGGCTG GCTGCCCTGG TTCGCGGACG GGCTCGCGCT TCTCTTCACC
ACGGCGAGCA TCGTTCTCTC CGCCTGGGCG CTCTACCAGC CGCACATGGT ATCGCTGCCC
GTCGCCGCCT TCCTTATTCC GACCATCGGC AGCTTCGTCT TCAAGTTCGT GCGCTCGCTC
TGGCTCTATG CGGTGCGTGT GCGCGATTGC AGTTTCATCG AAAGCCTCGG CGCCGGTGTC
GCCGCGCTCG GCCTCACCCA TACGGTCGCC AAGGCGATGC TCAACGGCAT GATAACGACG
AGCAAGCCCT TCATCCGCAC GCCGAAATGC GAGGACAAGC CACCGCTCGC CGCCGCCTTC
ATCCAGGTGC GCGAGGAAAC GGTGATGCTC GTCCTGCTCT GGGGCCTCAC CGCCGGCTTC
CTGCTGAGCC CCGACTTCGC GGACAGCCAG TCGCGCCTCT GGGTCGGCGT GCTGCTCGTG
CAGTCGGTGC CCTACGCCTC GGCCGTCCTC CTCTCGCTCA TCAACGTCAT GCCCTCCCTC
TTCCGCCGGA AGAAGAAAGA GGAACCGGCG GGCGTGCTGT CGCCGGCGGA GTGA
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| Protein sequence | MMDRPDPASL PAEPSPDAPK DNPRSWRHSV FVRQAAFFFI VLPLVIAANL AVWAAFNQPH
HAEAWTGEIV GLSYSPYRQG QDPTQNRHPS VAQMEEDMVQ LSGTVQAIRT YSVIRGQENI
PELAAKYGLS VAVGAWIGPD LERNERELEV LISLAPRRNV VRVLVGNEAL LRNDLPVEDL
IEYIKRAKEK IWKPLSTAEP PHIWLNNPDL VDAVDYIAVQ LLPYWEGIPI NEAVNSVFER
LDELREAYPG KPIVVTEVGW PSRGKIIPRR PYPGLPEWEL KTEAVPSLVN QATFMREFLN
RAKAEDITYY VMEAFDQPWK AAEEGAAGAF WGIYNADRQP KFPMAGSISE APEWRFWASL
AAGLALVPAM LFMLRQRHVR PVGVVFFAVL TQIAGSAIAW AGLSVTGLYF TWVGITVWSF
LFFAQGLLLI VLLAEAIEFV EVIWTRHGSR HFKPFDENAV SPTAMVSIHV PIHNEPPEMV
RETLQALANL DYDNYEVLVL DNNTVDPEVW QPVRDYCAQL GPRFRFFHLE NWPGFKAGAL
NFGLEKTAEE AEIIAVIDSD YQVEPSWLKV LVPYFDKQDV GFVQGPQDYR DRHESAFKNM
AYWEYAGFFH IGMVQRNNFN AIIQHGTMTQ VRKSALKRVG GWAEWCICED AELGIKLYRA
GYDSVYVNHS FGRGLTPDTL SGYITQRFRW AYGAVQIVKH HWDALAPWAS SKKGLTGAQR
YYFLAGWLPW FADGLALLFT TASIVLSAWA LYQPHMVSLP VAAFLIPTIG SFVFKFVRSL
WLYAVRVRDC SFIESLGAGV AALGLTHTVA KAMLNGMITT SKPFIRTPKC EDKPPLAAAF
IQVREETVML VLLWGLTAGF LLSPDFADSQ SRLWVGVLLV QSVPYASAVL LSLINVMPSL
FRRKKKEEPA GVLSPAE
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