| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0556 |
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| Symbol | |
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| ID | 5453993 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 608369 |
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| End bp | 609742 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640876124 |
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| Product | sodium:neurotransmitter symporter |
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| Protein accession | YP_001411836 |
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| Protein GI | 154251012 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0733] Na+-dependent transporters of the SNF family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTACAC CGTTTGCGCC ACGTCAATGG TCGTCGCGCT TTGCTTTTCT GATGGCGGCC
ATCGGCAGCG CCGTCGGTCT CGGCAATATC TGGCGGTTCC CTTACCTGGC GGGAGAGAAC
GGCGGCGGGG CCTTCATCGT GATTTACGCG ATCACGACCA TGGGCATCGC TCTGCCGATT
CTGGTGTCGG AGATCATGCT TGGCCGCATG GGGCGGCAGA GCCCGATCAA TACGATGCGC
AAGCTGATCG CCGAGAACCG TGCCGCGCGC TTCTGGACCC TGATTGGGTG GGGCGGCACC
GTCGGCGCTT TCATCGTCCT CTCCTATTAC AGTGTCATTG GCGGCTGGGC GCTGAAATAT
GTCGAGCTCG CGCTGACTGG TGCTTTCGCC GGTGAGACGA ATGCAGCCGC CGCTGAGCAA
TTCTCGGCTT TTGTGACAGA TCCCTACAGT GTCGCGCTGT GGCAGACGCT CTTCCTTGCC
GCCACCATAT TCATCGTCGC TGCCGGCGTA ACATCCGGTA TCGAGCGCGC GGTGGTGTTG
TTGATGCCGC TGCTCTTCTT TCTTCTCGTC GGCATGGCGA TCTACGCCAC GACCACGCCG
GGCTTCGGCG AGGCGATGAT CTTCATGTTC GCATTCGAAT TCCACGAGGT GACGCCGGAC
ACCATCCTCG CGGCAATCGG GCAGGGCTTC TTCTCCGTCA GCGTCGCATT GGGCGCGATG
ATGACTTACG GCGCCTATCT CGATAAGGAC GTTTCCATCG GCCGCTCGGC GATTGTCATT
GCGGTGGCGG ATACGCTGGT TGCGCTGCTG GCGGGGATCG CCATTTTCCC GCTTGTCTTC
AGCTATGGGC TTGAACCGTC GAGCGGCCCG GGACTGACCT TCATTACCTT GCCCATCGCC
TTCGGCACCA TCGGCGGTGG CGTTCTGATC GGCGCCGCTT TCTTTCTGCT GCTTTCGGTC
GCCGCGATCA CTTCCGCGAT CTCGCTGCTG GAACCGGTCG TTGCATGGGT GGAGGAGGGC
ATTCACATAC CGCGCAAATG GCTGGCGCTG ATAGTCGGCG GGGCGGCGTG GGTTGCCGGG
ATCGGAACGG TTCTCTCCTT CAACTTGTGG GCGGATTTTC ATCCGCTCGC CGGGCTCGGT
CTCATGGCCG ACAAGACGGT GTTCGATGTG CTGGATTTCA CGACCTCCAA TATCGTCATG
CCGACGGTGG GCCTGTTGAT GTCCCTTTTT GCAGGCTGGG TCCTTTCGAG CTCGGCCGCG
GAGGAAGCCT TGGGGGCGAG AGGGAAGCTC TGGTTCCGGC TCTGGCGCTT CGCCCTGCGT
TACGTTGCCC CCCTTGGGGT CATGTCGATT TTCGTGGCTA ACGTGCTGAT GTAG
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| Protein sequence | MTTPFAPRQW SSRFAFLMAA IGSAVGLGNI WRFPYLAGEN GGGAFIVIYA ITTMGIALPI
LVSEIMLGRM GRQSPINTMR KLIAENRAAR FWTLIGWGGT VGAFIVLSYY SVIGGWALKY
VELALTGAFA GETNAAAAEQ FSAFVTDPYS VALWQTLFLA ATIFIVAAGV TSGIERAVVL
LMPLLFFLLV GMAIYATTTP GFGEAMIFMF AFEFHEVTPD TILAAIGQGF FSVSVALGAM
MTYGAYLDKD VSIGRSAIVI AVADTLVALL AGIAIFPLVF SYGLEPSSGP GLTFITLPIA
FGTIGGGVLI GAAFFLLLSV AAITSAISLL EPVVAWVEEG IHIPRKWLAL IVGGAAWVAG
IGTVLSFNLW ADFHPLAGLG LMADKTVFDV LDFTTSNIVM PTVGLLMSLF AGWVLSSSAA
EEALGARGKL WFRLWRFALR YVAPLGVMSI FVANVLM
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