| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0554 |
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| Symbol | |
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| ID | 5453579 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 605273 |
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| End bp | 607249 |
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| Gene Length | 1977 bp |
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| Protein Length | 658 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640876122 |
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| Product | acetoacetyl-CoA synthase |
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| Protein accession | YP_001411834 |
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| Protein GI | 154251010 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | [TIGR01217] acetoacetyl-CoA synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGTCC AAGCAGAACC ATCGAACGCG CCGCTTTGGA CACCCTCCGA GGAAGCGATA
GCCTCGTCCA ACATGGTGGC GTTCATGAAG TTCGTGAATG CGCGGTACGG ACTGGATCTC
GACAACTACG CCGCTCTCCA TGAATGGTCT GTGGCAGCGC CTGCAGACTT CTGGGATGCG
CTCTGGGATC ACGCCGGCGT GGCGGGTGAC AAGGGACATA CGGTTCTTGC GAACGAAACC
GCTATGCCGG GCGCACAATT CTTTCCCGGC GCGGCGCTGA ACTTTGCGGA AAACCTGCTG
CGCTTCGACG ACGCGGAGCC AGCGCTTCTG TTCAACAATG AAGGCAGGAT GGCGAAGCCT
CTCGACAGGG GCGAATTGCG GCGCGAGGTC GCCCGGTTTG CCGTCGTCTT GAAGCGATGG
GGTGTCGGGC CGGGCGATCG AGTGGCGGCC TTCATGCCGA ATTGCCCGGA GACGATCGTC
GCCATGCTGG CAGCGGCGAG CATTGGCGCC GTCTTCTCCT CATGTTCGCC GGACTTCGGC
GTGCGCGGGG TTCTCGACCG GTTCGGCCAG ATAGGACCGA AGGTCCTCGT CGCTTGCGAT
GGATACCGCT ATGCCGGAAA GACACTGCCC GCGCATGACA AGCTCGGCGA AATCATAGAG
GGACTGCCGA CGCTGGAGCA TGTCGCCATT GTCCCATTTA TCGGCGAGGG ACCAAAAAAT
CTGAAGGCGG AGGATTGGCA GTCACTTCTC GCGGAGGTAA CGGATGAGCC ACTGACCTTC
GCGCGCCTTC CATTCGCGCA TCCGCTCTAC ATCATGTATT CGAGCGGCAC GACGGGCGTT
CCCAAATGCA TCGTTCACTC GGCGGGCGGC ACGCTGCTGC AACACCTGAA GGAGCATCTT
CTCCACTGCG ACATAAAACG CGGCGAAGTG CTTTTCTATT TCACCACCTG CGGCTGGATG
ATGTGGAACT GGCTGGTGTC GGGGCTGGCC GCCGGTGCGA CGCTGGCGCT TTACGACGGC
TCGCCTTTCG CGCCGGATGA GCGCGTATTG TTCGACTATA TCGACCAGGC GAAGATCAAC
GTCTTCGGCA CATCGGCGAA GTTCATCGAT GCGGTAAAAA AGTCGGGGCT GAAGCCGCGC
GAGACCCACG ATCTTTCGTC AGTGCGCATG ATCTTGTCGA CAGGCTCACC GCTGGTACCG
GAGAGTTTCG ACTTCGTCTA TGACGATATA AAAGACGATG CGGCGCTTTG TTCGATTTCT
GGCGGAACCG ACATCGTCTC TTGTTTTGTG CTCGGCAGTC CCTTGCTTCC GGTTTACCGC
GGCGAGATTC AAGCGCGGGG ACTGGGCATG GCCGTCGAGG TCTGGGATGA AAACGGCGCG
CCGCTGCCGC CGGGCGGGAA GGAGGCGAGC AAGGGCGAGC TGGTATGCAC AAAGCCCTTC
CCGTCCATGC CCATCGGATT CTGGAATGAC GATGACGGCC GTAAATATCG GGCTGCCTAC
TTCGATCGCT TCCCCGGCGT CTGGTGCCAT GGCGACTTCG CCGAAATCAC CGCGCATGAT
GGAGTGGTGA TCCATGGCCG CTCCGACGCA ACGCTCAACC CGGGCGGCGT CCGCATCGGC
ACGGCGGAAA TATACGCGCA GGTCGAGCAG ATGCCGGAAG TGCAGGAGGC GCTGGCCATC
GGTCAGGACT GGCAGGGCGA TGTGCGTGTG GTGCTTTTCG TCGTGATGAA GCCGGGCATT
TCTCTCGACG CCGGTCTCGA AAAAAGCATC CGGACGAAAA TCCGCGAGGG AGCCTCACCG
CGCCACGTTC CCGCGAAAAT CATTGCTGTT GCCGATATAC CCCGAACGAA GTCCGGCAAG
ATCACTGAAC TTGCGGTGAG GGACATCGTG CATGGCCGCG ATGTCAAGAA TCGGGAAGCG
CTGGCGAACC CGGAAGCGCT GGCGCTCTAC AAGGACCTGC CGGACCTGCG GAGCTAG
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| Protein sequence | MSVQAEPSNA PLWTPSEEAI ASSNMVAFMK FVNARYGLDL DNYAALHEWS VAAPADFWDA
LWDHAGVAGD KGHTVLANET AMPGAQFFPG AALNFAENLL RFDDAEPALL FNNEGRMAKP
LDRGELRREV ARFAVVLKRW GVGPGDRVAA FMPNCPETIV AMLAAASIGA VFSSCSPDFG
VRGVLDRFGQ IGPKVLVACD GYRYAGKTLP AHDKLGEIIE GLPTLEHVAI VPFIGEGPKN
LKAEDWQSLL AEVTDEPLTF ARLPFAHPLY IMYSSGTTGV PKCIVHSAGG TLLQHLKEHL
LHCDIKRGEV LFYFTTCGWM MWNWLVSGLA AGATLALYDG SPFAPDERVL FDYIDQAKIN
VFGTSAKFID AVKKSGLKPR ETHDLSSVRM ILSTGSPLVP ESFDFVYDDI KDDAALCSIS
GGTDIVSCFV LGSPLLPVYR GEIQARGLGM AVEVWDENGA PLPPGGKEAS KGELVCTKPF
PSMPIGFWND DDGRKYRAAY FDRFPGVWCH GDFAEITAHD GVVIHGRSDA TLNPGGVRIG
TAEIYAQVEQ MPEVQEALAI GQDWQGDVRV VLFVVMKPGI SLDAGLEKSI RTKIREGASP
RHVPAKIIAV ADIPRTKSGK ITELAVRDIV HGRDVKNREA LANPEALALY KDLPDLRS
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