| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0545 |
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| Symbol | |
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| ID | 5455417 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 593834 |
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| End bp | 595843 |
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| Gene Length | 2010 bp |
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| Protein Length | 669 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640876113 |
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| Product | 4-alpha-glucanotransferase |
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| Protein accession | YP_001411825 |
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| Protein GI | 154251001 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1640] 4-alpha-glucanotransferase |
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| TIGRFAM ID | [TIGR00217] 4-alpha-glucanotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 0.650062 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGGA TCGTCTCATT GGCTCAGGCC GCGGGTATTC AGGTCGAGTG GACGGATGCT
GCCGGCAGAC GGCAGCGCGT CAGCGAAGAC GCCCTTTCGG CGATCCTCGC GGCACTCGGC
TTGCCCGCCG ACAGCAGCTC GGCGATTGCC GATAGCTGCA ACCGGCTGGA AGAGCGCGCC
AGCGGTGAAA CCTCTTTTCT TTCAGGCGAT CAAGGCAGTG TGATCCGGTT GCAGGGCCGT
TATGGCGGAG CGAAGCGGGC GCGGCTTGTT CTGGAGGATG GCTCCGCGCG CGACGTGGTA
CTGGAGGACG GACAGGATGG CGCGATGCTC CCTGCCATCG GCCAACCGGG CTACCATCGG
CTCTTGCTGG ACGATCACGA AGTGCAGCTC GCAGTAGCGC CCCCGCATTG CTATCCGATA
GGTGAAGCCA CCGGGGGGCG TCGCGTCTGG GGCCCCGCCA TACAAATTGC GGCACTGCGC
GATGCGCGCG AAACGAGCTA TGGCGACTAC AGTTCTCTTG CCGATGCCGC CCGCGCCTTT
AGCGAGAGAG GCGCCGATGC CATGGCGATC AGCCCTGTGC ACGCACTTTT CCCGGCCGAT
ACAAGCCGCT ACAGCCCCTA CGCGCCATCG AGCCGGCTGT TCCTGAACGT CTTCTATGCG
GACCCGGCCC TGATCGGCGG CGCCATGCCG TCAGCTCCGC GAGCAGCACT TATCGACTGG
CCAGCCGCGA TACCCGAACG TCTGGGCGCG CTTCGGGCGG CTTACGACGG ACGGGACGCG
GGCGTGAAGG AGGCCGTCTC AGCCTATGTC GCGGAGGCCG GAGAGGAACT GCGGCGGCAC
GCCCTCTTCG ACGCGCTTCA CGCCCATTTT TTCAGGCAGA GCGGAGCAGG TGGCTGGCAG
GATTGGCCCA TCGAATATCG CAACCCATCG GACCGGGCGG TAGCCACCTT CGCGGCCGCG
CATGAAGACG AGGTCGGTTT TTATATTTTC CTGCAATGGC TTGCGGAAAA GGGTCTCGAC
GAGGCGCAGC GGTCGGCGCG ACAGGCGGGC ATGGCAATCG GCCTTATTGC CGATCTCGCA
GTTGGCATGG ACGCGGGGGG CAGTCATGCC TGGAGCCGGC CGGAAGAACT GCTGACCGGG
CTGTCGATTG GCGCACCGCC CGATCCGCTT GGGCCCGACG GACAAAACTG GGGCATCACC
GGATTTTCGC CGCAGGCACT CCAGCGCACC GGCTTTGATG CGTTCATCGC CACCATACGC
GCCGCGCTTC GCCACGCTGG CGGCATTCGC ATCGACCATG CGCTCGGGCT GCGCCGCCTA
TGGGTGGTGC CGTCGGGCGC CTCATCCGCG GATGGCGCCT ATCTCACTTA TCCCCTCGAC
GACATGCTTC GCCTGCTCGC ACTGGAATCG CAACGCGCCA AGGCGATCGT CATAGGCGAG
GACCTCGGCA CCGTTCCCGA AGGGCTTCGC GAGGAGATGG GCAGGAAAGA AATGCTCGGC
ATGCGCGTTC TCTGGTTTGA ACGCGGTGCG GACGAGGCAT TCCTTCCCCC GAAGGAGTGG
CAGGGGAAGG CAGCCGCGAT GACCGGCACT CACGACCTGC CGACAGTCGC CGGCTGGTGG
AGCGGCAGAG ATATAGACTG GACGTGGAAT TTGAAGCGAA AGGCGGACGC ACCAAGTGAG
GCGGAGCATC GGGAGGGTCG CGAACGGGAG CGGACAAAAT TCTGGGCGGC CATGCGCGAT
GCCGGCGTGA CGGACGCGGC GATGCCGGAG CCGGATGATG CGAACCCTGT TCTGGACGCC
GCTCTTGCCT TTGTGAGTGA AACGCCTTGC CCAATCGCCA TTCTGCCGAT GGAAGACATC
GTAGGGCTGG TGGAGCAGCC GAATCTGCCA GGCACCATGA ACGAGCATCC TAACTGGTGC
CGGCGGATGC CGGGACCGAC CCGCGACCTG CTCGATCAGC CGGATATTGC CCGGCGTATC
GCCATCCTCA AATCGAAGAG AGCAAGATGA
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| Protein sequence | MSRIVSLAQA AGIQVEWTDA AGRRQRVSED ALSAILAALG LPADSSSAIA DSCNRLEERA
SGETSFLSGD QGSVIRLQGR YGGAKRARLV LEDGSARDVV LEDGQDGAML PAIGQPGYHR
LLLDDHEVQL AVAPPHCYPI GEATGGRRVW GPAIQIAALR DARETSYGDY SSLADAARAF
SERGADAMAI SPVHALFPAD TSRYSPYAPS SRLFLNVFYA DPALIGGAMP SAPRAALIDW
PAAIPERLGA LRAAYDGRDA GVKEAVSAYV AEAGEELRRH ALFDALHAHF FRQSGAGGWQ
DWPIEYRNPS DRAVATFAAA HEDEVGFYIF LQWLAEKGLD EAQRSARQAG MAIGLIADLA
VGMDAGGSHA WSRPEELLTG LSIGAPPDPL GPDGQNWGIT GFSPQALQRT GFDAFIATIR
AALRHAGGIR IDHALGLRRL WVVPSGASSA DGAYLTYPLD DMLRLLALES QRAKAIVIGE
DLGTVPEGLR EEMGRKEMLG MRVLWFERGA DEAFLPPKEW QGKAAAMTGT HDLPTVAGWW
SGRDIDWTWN LKRKADAPSE AEHREGRERE RTKFWAAMRD AGVTDAAMPE PDDANPVLDA
ALAFVSETPC PIAILPMEDI VGLVEQPNLP GTMNEHPNWC RRMPGPTRDL LDQPDIARRI
AILKSKRAR
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