| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0544 |
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| Symbol | |
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| ID | 5454812 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 592119 |
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| End bp | 593837 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640876112 |
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| Product | malto-oligosyltrehalose trehalohydrolase |
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| Protein accession | YP_001411824 |
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| Protein GI | 154251000 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR02402] malto-oligosyltrehalose trehalohydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.6343 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 0.630983 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGCGT GGGGAGCGAC ATTGCTGGAG CCGGGGCGGA CAAGGTTTTC CCTGTGGGCG
CCGAATGCAG GCACCGTCGA GCTTGTCCTC GACGGAGGGA GGACGGTGCC GCTTGGACAG
ACGGCGAATG GCTGGTTCAT GGCGGAGGCG CCTGTTGGAG CCGGTGCCCG CTACCGTTTT
CGCGTGAACA ATGATCGTGC GGTGCCGGAT CCCGCGGCGC GTATGCAGTC AGATGGCGTG
CATGGCTGGA GCGTTGTGAT GGATCCGTCG ACCTACAAAT GGCGCTCGCT CAACTGGCGC
GGCAGGAAAT GGGAGGAGGC GGTCATCCAG GAGGTGCATC CCGGCTTGCT CGGCGGCTTC
TCCGGCATTG CAGACCGGCT TCCCGCTCTT GCTGATCTCG GCGTTACGGC CATTGAATTG
ATGCCTGTAG CCGCCTTCAG CGGCACGCGG AACTGGGGCT ATGACGGCGT GTTGCTTTAT
GCGCCGGCGG AGAGCTACGG AACACCGGAC GAATTGAAGG CGCTTGTCGA CAAGGCACAT
GAGCTCGGCC TGATGGTCTT TCTCGATGTC GTCTACAACC ACTTCGGGCC GGACGGTAAT
TACCTCGGCG TCTATGCGCG GGATTTCTTC GATCCGAGCG TTCACACGCC ATGGGGCGCG
GCCGTCGCCG TGGACCAGAA GCCGGTGGAG CGCTTCTTCA TCGACAATGC CTTGATGTGG
CTCGATGAAT ACCGCTTCGA CGGGCTGCGC TTCGATGCCG TTCAGGCGAT AGCCAACAAT
GACTTTCTCG ACCGGATGGC CGGAGAAATA AGAGAGAAGC TTGGCAGCGA TCGGTACATC
CATCTCATCC TCGAGAACGA GAACAACGAT CCCGACCGGC TTTCGGCGGG CCGCTACGAC
GCGCAATGGA ATGACGACTT CCACAGCGCA TTGCACGTAT TGCTGACAGG CGAAACGAGC
TCCTATTACG GCGATTTCGC CGCCCGTCCG ACGGAGATGC TCGCCCGGTG CCTTGCCGAA
GGCTTCGCCT TTCAGGGCGA GGTATCACAA CATCTCGATG GCAGGCGGCG CGGCGGGACA
AGCGCCCATC TGCCAGCGGC GGCGTTCGTC TCCTTTCTTC AGAACCACGA CCAGATCGGC
AATCGAGCGA TGGGAGAACG GCTTACCGTT CTCACCGACC CCGCAAGGCT TCGCGCGGCG
ACGGCTCTTC TACTGCTTTC TCCGCAGATC CCGCTCTTCT TCATGGGCGA CGAGGAAGGC
TCGCAAACGC CCTTTCTTTT CTTCACCGAT TTTCACGACG AACTCGCGGA TGCCGTGCGC
CGCGGACGTC GGCAGGAATT CGCGAAGTTT CCATCCTATG CGAACGAGGA AGCGCGCAAA
CGTATTCCGG ATCCGAACGC AGCCGATACC TATGAGCAGT CCCGCCCGCG GCCCGGACCG
GACGGAGAGA AGTGGAAAGT TCTCTATAAG GAACTTCTGC GGCTGCGGCA CAAGGAAATC
GTACCACGGC TGCAGGGCGC CCGCGGGATA GAAGCCGAAG TTCTCGCCAA GGGAGCCGCT
ATCGCAAGAT GGCGGATGGC CGACAACAGC GTGCTTGTGA TCGCCTTCAA TCTTGGAGAA
ACGCCGGCCG CCGTTCCGAT GCCGGGAGAC GGTGTTATCT ACAGTGAAGG TGAAACCGGA
ACCCCCGGCA GCATTGCCGT CTGGCTCGAA CGGATATGA
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| Protein sequence | MMAWGATLLE PGRTRFSLWA PNAGTVELVL DGGRTVPLGQ TANGWFMAEA PVGAGARYRF
RVNNDRAVPD PAARMQSDGV HGWSVVMDPS TYKWRSLNWR GRKWEEAVIQ EVHPGLLGGF
SGIADRLPAL ADLGVTAIEL MPVAAFSGTR NWGYDGVLLY APAESYGTPD ELKALVDKAH
ELGLMVFLDV VYNHFGPDGN YLGVYARDFF DPSVHTPWGA AVAVDQKPVE RFFIDNALMW
LDEYRFDGLR FDAVQAIANN DFLDRMAGEI REKLGSDRYI HLILENENND PDRLSAGRYD
AQWNDDFHSA LHVLLTGETS SYYGDFAARP TEMLARCLAE GFAFQGEVSQ HLDGRRRGGT
SAHLPAAAFV SFLQNHDQIG NRAMGERLTV LTDPARLRAA TALLLLSPQI PLFFMGDEEG
SQTPFLFFTD FHDELADAVR RGRRQEFAKF PSYANEEARK RIPDPNAADT YEQSRPRPGP
DGEKWKVLYK ELLRLRHKEI VPRLQGARGI EAEVLAKGAA IARWRMADNS VLVIAFNLGE
TPAAVPMPGD GVIYSEGETG TPGSIAVWLE RI
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