| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0537 |
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| Symbol | |
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| ID | 5456822 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 578475 |
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| End bp | 579476 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640876105 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
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| Protein accession | YP_001411817 |
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| Protein GI | 154250993 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 0.040794 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTCCCT CGTCCAGCCG CAAGGTCGTC GTCACGCAGC GTTTCTTCGA CGAAAAATCG
GCGGAATATC TGCGGGCCCA TGGCTGCGAG GTCGTGCTGG CCCCGCCGCC GCCCGGCCAG
GGCGATGGCG ACCTCGATCC CGCCGAGCTG CAGAGAATGC TGGCGGATGC GGCGGGCTGG
ATCGTCGGCC ATGCGCGGGT GACGCGGCCT TTGCTGGAGG CGCTGCCCGG ATTGCTCGTG
ATCGCCCGGC GCGGCGTCGG CTATGAGCGC GTCGATGTGG AAGCCGCGCG CGATCTCGGC
CGCGTTGTCA CCATCGCCGC GGGCGGTAAC GACGCCTCCG TCGCCGACCA CACCATCGGT
TTGATGATCG CTGTCGGCCG CCGCTTTCGC GCCTCGCAGG CGGACATGCA GGCCGGCGAC
TGGTCGATCC TCATGGGTAC GGATCTTTGC GAGAAGACGG TGGGGCTGAT CGGTCTCGGC
CGCATCGGGC GCAGCGTCGT GCGGCGCCTC TCCGGCTTCG ATGCCAAAGT GCTGGTGCAT
ACGCCGCATC CGGATGCCGC CTATGCGGAG CAGACCGGCG TCGAATATAC CGGCCTGACG
GAGCTGCTGC GCCGCTCCGA CTATGTCAGC CTCCATGCGC CGCTGACGCA AGCCACGCGG
TTCCTGATCG ACACGCGGGC CATTGCTTCC ATGAAGAAGG GCGCCTTCCT CATCAACACC
GCGCGCGGCG GCCTTGTCGA CGATGCCGCC CTGCTGACGG GTTTGCAGAA CGGTCATCTC
GGCGGCGCCG GTCTCGACGT CTTTGTCAGC GAAAGCGATC CGGCATTCCG GCCCGTCTCC
GACGCGTTGC TCGCCCTGCC GAATGTCGTG GCGACGCCCC ATGCCGGCGC CTCCTCGCAT
GAAGGGCTCG CGCGCACCAA CATGGTGGCA GCGAAATCCG TGGTTACGGT GCTTGATGGC
GGCATGCCCG CTCCCGGCTG CGTGGTGGCC GATGGGCGCT GA
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| Protein sequence | MPPSSSRKVV VTQRFFDEKS AEYLRAHGCE VVLAPPPPGQ GDGDLDPAEL QRMLADAAGW
IVGHARVTRP LLEALPGLLV IARRGVGYER VDVEAARDLG RVVTIAAGGN DASVADHTIG
LMIAVGRRFR ASQADMQAGD WSILMGTDLC EKTVGLIGLG RIGRSVVRRL SGFDAKVLVH
TPHPDAAYAE QTGVEYTGLT ELLRRSDYVS LHAPLTQATR FLIDTRAIAS MKKGAFLINT
ARGGLVDDAA LLTGLQNGHL GGAGLDVFVS ESDPAFRPVS DALLALPNVV ATPHAGASSH
EGLARTNMVA AKSVVTVLDG GMPAPGCVVA DGR
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