| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0536 |
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| Symbol | |
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| ID | 5453912 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 577130 |
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| End bp | 578461 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640876104 |
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| Product | CitMHS family citrate/H+ symporter |
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| Protein accession | YP_001411816 |
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| Protein GI | 154250992 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2851] H+/citrate symporter |
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| TIGRFAM ID | [TIGR00784] citrate transporter, CitMHS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 0.0343855 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGACA TCTTACTGAA CCCCGCCTTT CTCGGCCTGG CCATGGTCGT CACCTTCATG
GTGCTGATCA TGACCAAGCG AATGTCCGCC ATTGCCGCCC TGCTCGCGGT GCCGATCCTG
TTCGGCCTGA TCGCGGGCGC CGGCCCCGAA CTCGGAGAGA TGATTCTCAA GGGCGTGCTG
CAGGTATCGC CGACGGCGCT GATGCTGGCT TTTGCCGTGC TCTATTTCGC AATCATGATG
GATGCCGGTC TGTTCGATCC GCTGGTACGG CGCGTGCTGG CCCTGGTCGG CGACGATCCC
GTGCGCATCT GTCTCGGCAC GGCGCTGCTG ACCACCGTCG TGTCGCTGGA TGGCGACGGC
ACGACGACGG CGCTGATCAT CATCACGGCC TTCCTGCCGG TCTATCGCCG CATCGGCCTG
AACCCGCTGA TCCTGGCGAC GCTGCTCGGC CTGTGCAATT CGCTGATGAA TTTTGTGCCC
TGGGGCGGGC CCGCGGCGCG TGCGGCCGCC GCCGTGAATG CGGATCTCGG ACAGGTTTTT
GCCGGGCTGA TACCGGCGAT GATCGCCGGG CTGCTGGCCG TCTTCCTTCT TGCATGGATG
TTCGGTCTTT CGGAAAGACG CCGGCTCGCG GCGGCGGGAA GTGAAAGCGG CACCGGTCCC
GCCGTCGATG CTGCCGCCAT CCCGGAGATC GCGCATCCGG AAACGCGCCG TCCGAAGCTC
GTCTGGTTCA ACCTCGCGCT GACACTGGCG CTGGTGGCGG GCATGATTTT CGGTCTGGCG
CCGTTGCCTG TGATGATGAT GGGCGCCTTC GCCATCGCCA TCACCGTCAA TTACCCCAAT
ATCCGCGAAC AGCAGAAACG CATCGCCGAT CATGCGGAGA ATGTCGTCAA TGTCGTGGTG
CTGATCTTCG CTGCTGGCGC CTTTACCGGC ATTTTGAATG GCACCGGCAT GGCCGATGCG
ATGGCAGGGA GCGCACTGTC GATCATTCCG CCGTCGATCG GCACGTATCT CGCGCCGATC
ACGGCGCTTG CCAGCATGCC GCTGACTTTC GTCATGTCGA ACGACGCCTA TTATTTCGGT
GTGGTGCCTG TGATCGCCAG CACGGCGGCA AGCTACGGCA TTCCGGCGGA CGCCATTGCG
CGCGCTTCTC TCATCGGCCA GCCGGTACAT GCGTTGAGCC CTCTGCTCGC ACCGATCTAT
CTCGCCTGCG GGCTGCTGGG CGTCGATGTC GCCGATGCCC AGCGTTTCGC CCTGAAATGG
GCGGTGCTGA TCTGCCTTGT CGTTCTTGTC GCCGCGCTGG CGACCGGCGC CTTTCCGCTC
CGGGCCGGAT AA
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| Protein sequence | MLDILLNPAF LGLAMVVTFM VLIMTKRMSA IAALLAVPIL FGLIAGAGPE LGEMILKGVL
QVSPTALMLA FAVLYFAIMM DAGLFDPLVR RVLALVGDDP VRICLGTALL TTVVSLDGDG
TTTALIIITA FLPVYRRIGL NPLILATLLG LCNSLMNFVP WGGPAARAAA AVNADLGQVF
AGLIPAMIAG LLAVFLLAWM FGLSERRRLA AAGSESGTGP AVDAAAIPEI AHPETRRPKL
VWFNLALTLA LVAGMIFGLA PLPVMMMGAF AIAITVNYPN IREQQKRIAD HAENVVNVVV
LIFAAGAFTG ILNGTGMADA MAGSALSIIP PSIGTYLAPI TALASMPLTF VMSNDAYYFG
VVPVIASTAA SYGIPADAIA RASLIGQPVH ALSPLLAPIY LACGLLGVDV ADAQRFALKW
AVLICLVVLV AALATGAFPL RAG
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