| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0530 |
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| Symbol | |
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| ID | 5456802 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 568515 |
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| End bp | 569699 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640876098 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001411810 |
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| Protein GI | 154250986 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.727313 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 0.0367065 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATGGCG GAGTGATTGT GAGGCTCGCG GCTTTCTTTG TGATGGCCGC GGTCCTGAGC
GGGTGCGATG ACGGTGAGGA GCAGGGCGGT CCGCCGCCGC CGGAAGTCAG CGTCGTTACG
GTGAAGCCCG AGCAGCTGGA AGTGACGACG GAACTTTCCG GACGCACATC GGCCTACCGG
GTGGCGGAGA TCCGTCCACA GGTGAGCGGC ATCGTCCAGA AGCGTCTCTT TGAAGAGGGC
GCGAAGGTCG AGGAAGGCCA ACAACTCTAC CAGATCGATC CGGCGCTCTA TCGGGCAACC
TTCGACGCGG CGAAGGCCGC GCTGGCGAAG GCGGCGGCGA ACGAGAAGGC GGAGAGGGCC
CGCGCGGCGC GATACAAGGA ACTCGTTGCC GTAAATGCGG TGAGCAAACA GGACTATGAC
GACGTCATGG CCACGCTCGC CCAGAGTTCC GCAGATGTCG CGACCGCCAG AGCGAACCTC
GACACCGCGG AAACCAATCT GGCTTACACG AAAGTCTTTG CGCCGATTTC CGGGATCATC
AGCCGCTCCT CGGTGACGGA AGGCGCATTG GTCACGGCCA ACCAGGCGAC GGAACTCGCC
ACGGTGACGC AGCTCGACCC CATTTATGTC GATCTCACGC AATCCGCATC GGACCTGCTC
CGGTTGAAGC GGGCGATGGC CGAAGGCCGC ATCCAGGGTG CGAAAGACGG CAAGGCGCCC
GTGACGCTGA AGCTTGAAGG CAGCGAAGAA CAATATGGCG GCGCCGGCGA ACTTCAGTTT
TCCGGTGTCA CCGTCGCGCC GGACACGAGC ATGGTCCAGT TGCGCGCGAT CTTCCCCAAT
CCCAACGCCG AGCTTCTGCC TGGCCTTTTC GTGAGGGCCA TCGTGAACCA GGGCGTGCTC
GAAAACGCGA TCCTCGTGCC GCAGCAGGGC GTATCGCGGA CGCCGGATGG CAAGGCGCAG
GTCTGGCTCG TCGGCGACGG CGAGAAGGCG ATGCAGAAAT CCGTCACCGC GCTGCGTGCC
GTCGGCGACA AATGGCTCAT AACCGAGGGG CTCAAGGCAG GCGACCGTGT GGTGGTCGCG
GGCGTGCAGA AGCTGCAGCC GGGCATCGAG GTCAAGGCTG TGGAAGACGG CGAGGGAACG
CAACAGCCCG CGGGCGCCGC GGAGCGGCAG GGCCAGAAGC CCTGA
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| Protein sequence | MHGGVIVRLA AFFVMAAVLS GCDDGEEQGG PPPPEVSVVT VKPEQLEVTT ELSGRTSAYR
VAEIRPQVSG IVQKRLFEEG AKVEEGQQLY QIDPALYRAT FDAAKAALAK AAANEKAERA
RAARYKELVA VNAVSKQDYD DVMATLAQSS ADVATARANL DTAETNLAYT KVFAPISGII
SRSSVTEGAL VTANQATELA TVTQLDPIYV DLTQSASDLL RLKRAMAEGR IQGAKDGKAP
VTLKLEGSEE QYGGAGELQF SGVTVAPDTS MVQLRAIFPN PNAELLPGLF VRAIVNQGVL
ENAILVPQQG VSRTPDGKAQ VWLVGDGEKA MQKSVTALRA VGDKWLITEG LKAGDRVVVA
GVQKLQPGIE VKAVEDGEGT QQPAGAAERQ GQKP
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