| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0517 |
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| Symbol | |
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| ID | 5456814 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 557887 |
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| End bp | 558429 |
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| Gene Length | 543 bp |
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| Protein Length | 180 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640876083 |
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| Product | helix-turn-helix domain-containing protein |
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| Protein accession | YP_001411797 |
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| Protein GI | 154250973 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 0.970363 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACATGC ACATCGCAAC GGAGCCTTCT TCCGCGCCGC AGCGCAGTCT CACGGCAGTT
CTGGCAGGCC TGCTCGAAGA TGCGGACAAG GTCATCGACA CCGATCGCCA GGCCGCGCGC
GCCTTCATCA CCCGCGCCGC CGGTCTCCTG CAGGTTGAAG CAGCGCCCGC CGCGGATGAA
AGAAAGCCCC GCTCTTCCGG CGGGCTCGCG CCCTGGCAGA TGCGCCGTGT CGTGGCGCAT
ATCGACGCTT CGCTCCCCGC TCTCGTTCCG CTGGGGGATA TCGCGGCCAT CGCCCGGCTC
AGCCCCGGCT ATTTCTCGCG CGCCTTCAAG GTCAGCTTCG GCGTCACGCC CCAGACCTAT
ATCCTCCGCA GACGGATCGA ACGCGCACAG GAAATGATGC TGGCAAGCTC CCTGCCGCTC
GCCGTGATCG CGGTGGATTG CGGCTTTTGC GATCAGGCCC ATTTCTGCCG CCTGTTCCGG
CGCCACGCCG GCACAAGCCC CGGCACCTGG CGCCGCACCC GCCAGCTCGC CCAGGCGGCC
TGA
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| Protein sequence | MHMHIATEPS SAPQRSLTAV LAGLLEDADK VIDTDRQAAR AFITRAAGLL QVEAAPAADE
RKPRSSGGLA PWQMRRVVAH IDASLPALVP LGDIAAIARL SPGYFSRAFK VSFGVTPQTY
ILRRRIERAQ EMMLASSLPL AVIAVDCGFC DQAHFCRLFR RHAGTSPGTW RRTRQLAQAA
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