| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0513 |
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| Symbol | |
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| ID | 5455547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 553710 |
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| End bp | 555137 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640876079 |
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| Product | deoxyribodipyrimidine photo-lyase |
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| Protein accession | YP_001411793 |
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| Protein GI | 154250969 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0415] Deoxyribodipyrimidine photolyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 0.237418 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCCA GTCCCGCCAT CCTTTGGTTC CGCCGAGACC TGCGCCTCGA CGCCAATCCG
GCGCTCGCCG CCGCTATGGC GCGCGGTCCC GTCATCCCTC TCTTCATCCT CGATCCGGCG
GACCGGCCCG GCGCCGCCTC CCGCTGGTGG CTTCATGGCA GTCTCGAAGC CCTTGGTGAA
AGCCTCGCCC GTCTCGGCGC GCCGCTCATC CTTCGTCGCG GTTCTCCATC GGAAATTCTT
CCCGCCCTCA CGGCGGAAAC GGACGCCCGC GCCATTTTCT GGAACCGCCT CTACGAGCCG
CATTTGATCG GGCGCGACAA GGCGCTCAAA TCCGCGCTCA CGGCTCAGGG CATCGAGGTA
GAGAGCTTCA ACGGTTCCCT CCTCGCCGAG CCGTGGCAGG TGCGCACGCA ATCGGGCGAT
CCCTACAAGG TCTTCACGCC CTTCTGGCGC AGCCTCGCGC AAATGCCCTT CCCCGCGCCG
CATCCCGCGC CGAAGAAATG CGCGGGCCTT TCCCCGCTCC CCTCGGACGA TCTTGCTTCT
TGGTCGCTCC GCCCCTCGAA GCCCGATTGG GCGGGCGGCC TCCGCGCGAC ATGGCAGCCC
GGCGAGCGCG CCGCCCAGTC CCGCCTCGCA GCCTTCATCG ACGATGCGAT GGTGGGTTAC
CGCGAAGCCC GCGACATCCC CGCCGCCGAA GGCACCTCTC GCCTCTCGCC GCACCTCCAT
TGGGGAGAGG TTTCCCCGCA CCGCATCTGG TCTGCCGTCG AAGCGGCAAC TGCCGCGCAT
CCCTCGGGTG CCGAAGCGGG CAGGGCCTTC CTGCGCGAGC TCGCCTGGCG CGACTTCGCC
CATCATCTTC TCTTCCACTG GCCGGACATC GCGCGTGAAA ACTGGAAATC GCAATTCGAT
GCCTTCCCGT GGAAGGAAGA CACCGCCGCC TTCACCGCCT GGACGAAAGG CGAAACCGGC
TACCCCATCG TCGATGCCGG CATGCGCCAG CTCTGGCAGA CCGGCTGGAT GCATAACCGC
GTCCGCATGA TCGCCGCCTC CTTCCTCGTC AAGCATCTGA TGGTTGACTG GCGGCGCGGC
GCCGAATGGT TCGAGAATAC GCTGGTCGAT GCCGACCTCG CGGTAAACCG CGCGAGCTGG
CAATGGGTCG CCGGTTCCGG CGCCGATGCC GCGCCCTACT TCCGTATCTT CAATCCGGTG
TTGCAGGGTG AGAAGTTCGA TGGCGATGGG GCCTATGTCC GCGCCTTCGT GCCGGAGCTG
GCGAAGCTCG ACGCCCGCTT TATCCACAAG CCCTGGGCCG CGCCCGACGC CGAACTGTCA
AAGGCGGGCA TCGCCCTTGG CAGGACTTAT CCGAAGCCAT TGGTCGATCA TGGACATGCC
CGCGCCCGCG CGCTCGCCGC CTATGAACAA ATCCGCAATG AGAGCTGA
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| Protein sequence | MSASPAILWF RRDLRLDANP ALAAAMARGP VIPLFILDPA DRPGAASRWW LHGSLEALGE
SLARLGAPLI LRRGSPSEIL PALTAETDAR AIFWNRLYEP HLIGRDKALK SALTAQGIEV
ESFNGSLLAE PWQVRTQSGD PYKVFTPFWR SLAQMPFPAP HPAPKKCAGL SPLPSDDLAS
WSLRPSKPDW AGGLRATWQP GERAAQSRLA AFIDDAMVGY REARDIPAAE GTSRLSPHLH
WGEVSPHRIW SAVEAATAAH PSGAEAGRAF LRELAWRDFA HHLLFHWPDI ARENWKSQFD
AFPWKEDTAA FTAWTKGETG YPIVDAGMRQ LWQTGWMHNR VRMIAASFLV KHLMVDWRRG
AEWFENTLVD ADLAVNRASW QWVAGSGADA APYFRIFNPV LQGEKFDGDG AYVRAFVPEL
AKLDARFIHK PWAAPDAELS KAGIALGRTY PKPLVDHGHA RARALAAYEQ IRNES
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