Gene Plav_0512 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0512 
Symbol 
ID5453947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp552465 
End bp553574 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content61% 
IMG OID640876078 
Producthypothetical protein 
Protein accessionYP_001411792 
Protein GI154250968 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.213619 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value0.27094 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCATA TCACCAAGGA CAGCGCCTAT AACGCCGTGG CGCCGGACGA TTTTCCCGCG 
ATGATGGAAG TCGACCGCTA TGGCGCGCGC TCAACCGCCT TCGACAAGAT CATCTCCGCG
ACGCATGACC ATTTCTGGGA TCCGCTGGAC AAGAAATATA TCGACTTCAC GCAGCCCTTC
GACATGAAGC GGCAGACCGT GGTGCCGATG GATTTCGTGC TGGAACTGCA GACGCCCATC
GCCGACCGGC TGAGCGAGGA AGAGAAGATC GCGCTGTCGA ACGAAAGCGC GCGGTGGATG
CTGTCGTCGA TCCTGCATGG CGAGGCAGGC GCGCTCGCGC TTTCCGCCAG CCTCTGCCAC
ATATTGAAGG ACCCGGGCGC GCAGGAATAT GCGGCGAACC AGACGCGCGA GGAAGCCCGC
CACGTGACGG GCTTTGCGAA ATATATCGAG GCGCGGTGGG GGAAGCCGCT GCCTGTCGGC
CCGACGCTCG GCAATCTCCT CACCGACATC GTGAACGCGC CGGAGGTCTA CAAGAAGGTC
GTCGGCATGC AGATGCTGGT GGAGGGGCTG GCGATGGGCG CCTTCGCCTC GCTCTATTCC
TATTCGCACG ATCCGCTGCT GCGCCATCTC TGCCAGCTCG TGATGACGGA CGAAGCCTTC
CACCACAAGT TCGGGAAAAT CTGGGCGGAC CGCACGGTGC CGCATCTGAC CGAGCAGGAG
CGCAACGTCA TCGAGGACTG GGCGGCGGAA TGTTTCCAGA CGCTGCTCTT CAACCTTGCC
AACCCGGAAC AGAAGAAGGT GATCTATGCG CAGTTCGGCC TCGACTGGGA GGAAGTGCTG
CATGAGGTGC TGAAGAGCCG GACCGACGAG AAGCGCCGCA AGGCGATGTC GAACCAGACG
AATATCTTCC GGGTGCTGAC CAAGACGCTG CTGAAGGCGG GCATCATCAC CGACCGGACG
AAGGGTTTCT ATGCGACCTA TGTCGACATG GACGAACTGC GCAAGGAAGG CGACGAGATG
ATCGGCGATT CGATTGCCGA GGACGGCATC GAGTATCTGA AGCGGGTGAA TTTTTCCGGT
GCGGGGAGAG CGGTGAGCGC GGCGGAGTAG
 
Protein sequence
MTHITKDSAY NAVAPDDFPA MMEVDRYGAR STAFDKIISA THDHFWDPLD KKYIDFTQPF 
DMKRQTVVPM DFVLELQTPI ADRLSEEEKI ALSNESARWM LSSILHGEAG ALALSASLCH
ILKDPGAQEY AANQTREEAR HVTGFAKYIE ARWGKPLPVG PTLGNLLTDI VNAPEVYKKV
VGMQMLVEGL AMGAFASLYS YSHDPLLRHL CQLVMTDEAF HHKFGKIWAD RTVPHLTEQE
RNVIEDWAAE CFQTLLFNLA NPEQKKVIYA QFGLDWEEVL HEVLKSRTDE KRRKAMSNQT
NIFRVLTKTL LKAGIITDRT KGFYATYVDM DELRKEGDEM IGDSIAEDGI EYLKRVNFSG
AGRAVSAAE