| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0505 |
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| Symbol | nrdF |
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| ID | 5454596 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 546114 |
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| End bp | 547073 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640876071 |
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| Product | ribonucleotide-diphosphate reductase subunit beta |
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| Protein accession | YP_001411785 |
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| Protein GI | 154250961 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0208] Ribonucleotide reductase, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 0.350421 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCCTCC TCGAAGAACG CCACGTCTAC AAGCCCTTCC GCTACCCTTG GGCCTATGAA
GCCTGGCTCA CGCAGCAGCG CATCCACTGG CTGCCGGAGG AAGTGCCGCT GGCCGACGAT
GTGAAGGACT GGTCGAAAAA GCTCACCGAG GGCGAGCGCA ACCTGCTCAC GCAGATTTTC
CGCTTCTTCG TGCAGGCCGA CGTCGAAGTG AACAATTGCT ACATGAAGCA TTATTCGCGC
GTCTTCAAGC CGACCGAAGT GCAGATGATG CTGGCCGCCT TCTCCAATAT CGAGACGGTC
CATATCTCAG CCTACAGCCA TCTGCTCGAC ACGATCGGCA TGCCGGAGGC CGAATACGAG
GCCTTCCTGA AATACGAACA GATGAAGACC AAGTTCGACT ACATGCAGGA ATGGGGCGTC
GAGACCAAGG CGGATATCGC CAAGACGCTC GCCGTCTTCG GCGGCTTCAC CGAGGGCGTG
CAGCTCTTCG CTTCCTTCGC GATCCTCATG AATTTCCCGC GCTTCAACAA GATGAAGGGC
ATGGGCCAGA TCGTGACATG GTCGGCCCGC GACGAGACGC TCCACACCGT CTCCGCCATG
AAGCTTTTCC GCACCTTCGT CGACGAAAAC CCGGAAATCT GGACCGAAGA GCTTCGCCGC
GACATCTATA AAGCCTGCGA AACCATCATC CATCACGAGG ATGCCTTCAT CGACCTCGCC
TTCGAGATGG GCAGCATCGA AGGCCTCTCG GCGCAGGAAG TGAAGAACTA CATCCGCTAC
ATCGCCGACC GCCGCCTCGT GCAGCTCAAT CTCCAGCCCA TCTACCGCAC GGAAAAGAAC
CCGCTGCCCT GGATGGACGA GATGCTGAAC GGCATCGAGC ACACCAACTT CTTCGAGAAT
CGCGCGACGG AATATTCCAA GGCCTCGACG CGCGGAAGCT GGGAAGACGC GTTCGAATAG
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| Protein sequence | MSLLEERHVY KPFRYPWAYE AWLTQQRIHW LPEEVPLADD VKDWSKKLTE GERNLLTQIF
RFFVQADVEV NNCYMKHYSR VFKPTEVQMM LAAFSNIETV HISAYSHLLD TIGMPEAEYE
AFLKYEQMKT KFDYMQEWGV ETKADIAKTL AVFGGFTEGV QLFASFAILM NFPRFNKMKG
MGQIVTWSAR DETLHTVSAM KLFRTFVDEN PEIWTEELRR DIYKACETII HHEDAFIDLA
FEMGSIEGLS AQEVKNYIRY IADRRLVQLN LQPIYRTEKN PLPWMDEMLN GIEHTNFFEN
RATEYSKAST RGSWEDAFE
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