| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0500 |
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| Symbol | |
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| ID | 5455760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 539263 |
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| End bp | 541089 |
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| Gene Length | 1827 bp |
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| Protein Length | 608 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640876066 |
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| Product | sodium/hydrogen exchanger |
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| Protein accession | YP_001411780 |
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| Protein GI | 154250956 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3263] NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0245914 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTTTG CTAACCAGAT CATCCTGGTT TCGGCTGCAT TAATTACCTT TTCGATTTTC
GCGGGGGCGC TCTCCTCACG GATCGGCGCT CCCCTGCTGC TGGTCTTTCT GGCATTCGGC
ATGCTGGTGG GCGAGGAAGG CCCCGGCGGT ATCGTTTTCA ACGATTTCCG CCTGGCCTAT
CTGGCCGGCT CCTTCGCCTT GGCCATCATC CTGTTCGACG GTGGCTTGCG GACCAGCCGT
AACGCCCTGG CACGCGCCTG GGCTCCCGCA GGCGCCCTCG CGACGATAGG CGTCTTGCTC
ACCGCCGCCA TCACCGGCGT CGCCGCCAAG TTCCTGCTCG GCATCGGGTG GGTCGAAGCC
TTTCTGCTCG GCGCCATTGT CGGCTCCACC GACGCCGCCG CCGTCTTCCT GCTGCTCCAT
CAGCGTGGGC TCCGCTTGCG CGCCCGCGTC TCCGCCACGC TGGAAGTCGA ATCCGCCATC
AACGACCCGA TGGCGATCTT TCTCACACTC GCATTGGTCG GCATTGCGGT TGAGGGCGTT
CAACTGGACA GCGTCGGGGC TGTCATCGGG GAGATCGGCA ACTTCCTGTG GCAGCTCGTA
GGCGGTGTTA TCTTCGGCCT CGCCGGCGGC TGGTTCGTGG TCCGCGCGAT CAACCGGCTG
CAATTGTCGC CTGGTCTTTA TCCCATCATG GCCGGGGCCT TGGCGCTGCT CGTCTTCGCG
TTGACGCAAA GCGCCGGCGC CAGCGGCTAT GTGGCGATCT TTCTCATCGG CTTTACGGTT
GGCAACACGC CACACAGGGC CACCAGCGAG ATCTCGCGCT TTACCGACGG CATGGCATGG
CTCGCGCAGA TATGCATGTT CCTCATGCTC GGCCTGCTGG TTACGCCCTC TTCCCTGTTG
CCGATCCTTT TGCCCGCGAT AGCTGTGGCG GTGGTCCTGT TCTTTGTGGC CCGGCCCATT
GCCGTCTGGC TATGTCTCAA GCCGCTGAAA TTTGCGCCAA ACGAGACGCT GTTCATTTCA
TGGCTCGGCC TTCGCGGTTC TGTGGCCGTC TTTTTGGCGG TCATTCCGGT CTTTGCCGGC
GTGGAAGGGG CCTCCACCCT GTTCTCGGTT GCTTATGTGA TCGTGCTGGT CTCGCTGGTG
GCGCAGGGTT GGACAATTGC GCTCACGGCC CGGTGGACAG ATGTCGAATT GCCGCCGCGC
CCCACGGCAA AGCGCGGCGT CGAGCTCGAC CTGCCCGCCG GCAAGGGCAA GAGCGTCGTT
GCCTATACGG TCGATCCGAT GAGCATTCTC GTGCTGCGCA GGATGAAGCG CCTTCCTCTG
CCCGAAGGCA CGACCGTCAT CTCCGTGATG CGCGCTGGCG TCGCGCGCAC CGAGGGCCTG
CATGAGGGGC TTGAGGCCGG CGATGTGGTG CTGCTGCTCA TCAACGTGGA TGCCGTGCCC
GCGCTCGACC GCCTTTTCGG CGCGCGAAAG TCGCGCAGTG CCGAAAAGGA AGGAAAAATC
GTCGACTTCG TGATCGACGG CCATACCTCC GCCGCCGCGG TCGCCAACAT GTACAGCCTC
GCCTTCACCC CCGAAGAACG CGAACTGACG CTGGAGGAGT TCATGCGCTC CCGTTTGGGC
CGCGAGATCA AGACCGGCGC CCGTACCCGG GTGGGCAGCG TCGATCTGGT CGCCGTGCAG
GTGACGGATG GCGAAGTCCA TCAGGTTGGC CTCGATCTCG ATCCCCCGCC GGAGAAAACC
TTGCTCGGCC AATTGCAGAC GAGGTTCCGC GCCGGTGTGG AAACACTCCG GGACCTCTTT
CTCGCGGATG CCAGCCGTCC TTCCTGA
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| Protein sequence | MDFANQIILV SAALITFSIF AGALSSRIGA PLLLVFLAFG MLVGEEGPGG IVFNDFRLAY
LAGSFALAII LFDGGLRTSR NALARAWAPA GALATIGVLL TAAITGVAAK FLLGIGWVEA
FLLGAIVGST DAAAVFLLLH QRGLRLRARV SATLEVESAI NDPMAIFLTL ALVGIAVEGV
QLDSVGAVIG EIGNFLWQLV GGVIFGLAGG WFVVRAINRL QLSPGLYPIM AGALALLVFA
LTQSAGASGY VAIFLIGFTV GNTPHRATSE ISRFTDGMAW LAQICMFLML GLLVTPSSLL
PILLPAIAVA VVLFFVARPI AVWLCLKPLK FAPNETLFIS WLGLRGSVAV FLAVIPVFAG
VEGASTLFSV AYVIVLVSLV AQGWTIALTA RWTDVELPPR PTAKRGVELD LPAGKGKSVV
AYTVDPMSIL VLRRMKRLPL PEGTTVISVM RAGVARTEGL HEGLEAGDVV LLLINVDAVP
ALDRLFGARK SRSAEKEGKI VDFVIDGHTS AAAVANMYSL AFTPEERELT LEEFMRSRLG
REIKTGARTR VGSVDLVAVQ VTDGEVHQVG LDLDPPPEKT LLGQLQTRFR AGVETLRDLF
LADASRPS
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