Gene Plav_0480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0480 
Symbol 
ID5455226 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp520933 
End bp522099 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content62% 
IMG OID640876046 
Producthypothetical protein 
Protein accessionYP_001411760 
Protein GI154250936 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTACG AAGTCGAGCG CATTCCCTTT CACCTGCACT GGCGGGAGAG CTCGGCTTTC 
AAGGAAACCT ATGCAGGCGC GATGGACAGC ATCGTCGTCG AAGGACAGCA CCTGAAGCCG
AAAGGTTCGA CTTCAAAGAC GGTGCTGATC TTCATGCATC CGACGGGGAC GATGAACCTG
CTGCCGATGC CGAACGGGCT GGCGGCGGCG GGCATCCCCT GCCTCACCTG CGGCAGCCGC
TATCCGCATA ATGACAGCGC GCTCATCATG GAGAAGGTGC TGCTCGATCT CGGGCATTAC
ATTCGATATG CGAAGGAGAA ACTCGGCTAC GAGAAAGTGG TGCTGGCGGG ATGGTCCGGC
GGCGGGTCGC TTTCGATGTT CTATCAAAGC CAGGCCGAGA AGCCGACGAT CACCAAGACG
CCGGCGGGCG ACCCTGTGGA CATTGCGGGC GCGGGGCTTA TTCCGGCCGA TGCTGTGCTG
CAGCTTGCGG CGCATGTGAG CCGGGCGATC ACGCTGACCG AATGGCTCGA CCCGTCGATC
CGCAATGAGC TCGACCCATC GGACCGAGAG CCGGAGCTCG ATCTCTACAA CCCGGACAAT
CCGAATCAGC CGCCCTATAC GGACGCCTAT GTGCAACGCT ATCGCGCGGC GCAGATTGCA
CGGTCCGGGC GGATCGACGC CTGGGTGCAT GGCAAGCTCG AACAGATGAA ACGCGAGGGG
CGGGAGAATG AGGAGCTCTC CTTCGTCGTC CACGGGACGA TGGCGGACCC GAGATGGCTC
GATCTTTCCA TCGACCCGAA TGAGCGCAAG GGGCCGAACT GGTGCTTCAT GGGGGAGCCG
AAGATCGTCA ACATGATGCC GGCGGGGCTG GCGCGCTACT GTTCGCTGCG CTCGTGGCTC
TCGCAATGGT CCTACCGGGA AAGCCGGGCG GACGGGCCGA AATGCGCGGG CGACATATCC
GTGCCGGTGC TGGTGATCGA AAACGGCGCG GATGACGGCT GCACGCCTTC CCATGCGGCG
CGGATTTTCG CGGGCGTCCG GCACGACGAC AAGGAACTTC ACCTCGTCAA AGGCGCGACA
CACTATTATA TAGGGCAACC CGACAAAATG GCCGAGGCCA TGAGTATCGT GGCCGGGTGG
CTGAAAAAGA AAAAACTGCT GGATTGA
 
Protein sequence
MAYEVERIPF HLHWRESSAF KETYAGAMDS IVVEGQHLKP KGSTSKTVLI FMHPTGTMNL 
LPMPNGLAAA GIPCLTCGSR YPHNDSALIM EKVLLDLGHY IRYAKEKLGY EKVVLAGWSG
GGSLSMFYQS QAEKPTITKT PAGDPVDIAG AGLIPADAVL QLAAHVSRAI TLTEWLDPSI
RNELDPSDRE PELDLYNPDN PNQPPYTDAY VQRYRAAQIA RSGRIDAWVH GKLEQMKREG
RENEELSFVV HGTMADPRWL DLSIDPNERK GPNWCFMGEP KIVNMMPAGL ARYCSLRSWL
SQWSYRESRA DGPKCAGDIS VPVLVIENGA DDGCTPSHAA RIFAGVRHDD KELHLVKGAT
HYYIGQPDKM AEAMSIVAGW LKKKKLLD